Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01053 ATGTGGATCACAGACACAAAGTGTCGCACGTTTTTGCTTTGCAAGTTGCGACTCTCTCTACCTACAACAACCGTTTTCGCTCGCCGGAAACTGCCATTGATCTGTCTCTCCGCCGATCCCTCCGCCATGAGTTCCGTCGAGCTCCTCCATATACAGCCCCAGGAGCTTCAGTTTGCCTTTGAATTGAGGAAGCAGATCTCATGCTCTTTGCAGTTGTCTAACAAGACAGACAACTATGTGGCTTTCAAGGTTAAGACAACAAATCCTAAGAAATACTGTGTTAGACCTAACACTGGAGTTGTGATGCCTAGGTCCACATGTGATATCACAGTAACAATGCAATCACAAAAGGAGGCGCCCCTAGACATGCAATGCAAGGATAAGTTTCTCCTTCAGAGTGTAGTTGCAAGCCCTGGTGCAACCACAAAAGATATCACTCCAGAAATGTTCAATAAAGAATCTGGTCATGATGTCGAAGAGTGCAAGTTGAGAGTTGTTTATGTTGCTCCTCCTCAACCACCATCCCCTGTTCGAGAAGGATCTGATGAAGATTCTTCACCTCGTGCATCTGTATCTGAAAATGGGCATTCAAATGCTTTGGAATTTACTGCAGCTTCAAAAGCTTTCAATGAGCGAGGTGAGCATCAGGACACTTCTTTTGAGGCAAGAACTCATATTTCAAAGGTAACTGAGGAGAGGAATTCTGTTATTGAGCAAAACAAAAGACTTCAGCAAGAACTGGAGCTTTTGAGGCGCCAAGCCCGCAGTAGCCGTGGCGGCGGCATACCATTCATGTACGTAGTTCTTGTTGGCATCTTTGGCATCATTCTGGGTTTCCTACTGAAGAGGACGTGA 855 0.4561 MWITDTKCRTFLLCKLRLSLPTTTVFARRKLPLICLSADPSAMSSVELLHIQPQELQFAFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVMPRSTCDITVTMQSQKEAPLDMQCKDKFLLQSVVASPGATTKDITPEMFNKESGHDVEECKLRVVYVAPPQPPSPVREGSDEDSSPRASVSENGHSNALEFTAASKAFNERGEHQDTSFEARTHISKVTEERNSVIEQNKRLQQELELLRRQARSSRGGGIPFMYVVLVGIFGIILGFLLKRT 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01053 284 MobiDBLite consensus disorder prediction 169 197 - -
Phco1g01053 284 ProSiteProfiles Major sperm protein (MSP) domain profile. 48 168 IPR000535 -
Phco1g01053 284 SUPERFAMILY PapD-like 41 182 IPR008962 -
Phco1g01053 284 FunFam Vesicle-associated protein 1-1 43 171 - -
Phco1g01053 284 Gene3D Immunoglobulins 42 172 IPR013783 -
Phco1g01053 284 Coils Coil 226 253 - -
Phco1g01053 284 PIRSF VAMP_assoc_prot 41 283 IPR016763 GO:0005789
Phco1g01053 284 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 47 280 IPR016763 GO:0005789
Phco1g01053 284 Pfam MSP (Major sperm protein) domain 49 152 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01053 Phco-Chr1 12138927 12147574 Transposed