Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g01052 | ATGGGAAAGTACGGGGGTGCAGAAAGAAATCGCCCCAATGCAAAACGTATGGCTACTCCTCGCCCACACGATGGTGGTGGAACTGAAGCGAAAGAGCAAGCAAAAATCACAGAACAATCCGAAATGGCGAAGCGAGGAACTTCTGATTCCGAATCCGAGGACGCTTCAATTTCAGGGTCAGAGTCCGAGGAGGCACAAACGATGGACAATGGGAAAAAGGGTGTGACGGAGTACGAGAAACAGAGGCTGTCGAGAATGGCGGAGAACAGAGCCAGGTTGGAGGCTCTGGGCTTGCCCCAAATGGCTCTCTCCTTGAAAAGTTCGCATCTTCACACCGCTAAGAAGGGAAAAGAGAAGAAGGTTGAAGAAGACGATGATGAAGAGTATGTACCCGAAAATGAGAGAGGACCCGGTTCAAGTTCTTCAAGTGAACATGAGGAGGACCGTAAAGATGAAGACTTCGCTACTAAAAAATCTTCTGGGTCGCGGAAAAGGAAGGTGAAGAACAAAGGTCTGAAAAAGAAAGCTAAGGTCTCTGGGAAGATGGATGCCAGTAATTCAAAGTACATTGATTATTATGATGATGATGAAGCTTTGAGGCAGGCAATTGCTCTTTCCTTGCAAAACTCTGCTGAAGGTTCATATTTACCTGACCAGAATGTATTGAACATTAACAAGATTGAGGAAAAGGGAAACAATCAAACTCACGAAGATAAGGGAAGAAAGAAGAACAAAAAATCATTTGCAAGTCGGCTGCAACTCACGGAGGATGAGCTCATTGTACACTTCTTCCAGCTTGATGAAGCTGGAAAAGGAACTATAAATGTAAGGGATTTACAAAGGGCAGCTACAGCTCATGATTTTTTATGGACAGACAAAGAATTACTTGATATGATCCACTGCTTCGATAGTGATGGAGATGGAAAGCTAAGTCTTGATGATTTCCGGAAGATTACTATTCGTTGTAACATGATTAAAGAGTCTGGAAAATCTTGA | 996 | 0.4367 | MGKYGGAERNRPNAKRMATPRPHDGGGTEAKEQAKITEQSEMAKRGTSDSESEDASISGSESEEAQTMDNGKKGVTEYEKQRLSRMAENRARLEALGLPQMALSLKSSHLHTAKKGKEKKVEEDDDEEYVPENERGPGSSSSSEHEEDRKDEDFATKKSSGSRKRKVKNKGLKKKAKVSGKMDASNSKYIDYYDDDEALRQAIALSLQNSAEGSYLPDQNVLNINKIEEKGNNQTHEDKGRKKNKKSFASRLQLTEDELIVHFFQLDEAGKGTINVRDLQRAATAHDFLWTDKELLDMIHCFDSDGDGKLSLDDFRKITIRCNMIKESGKS | 331 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g01052 | 331 | Gene3D | - | 216 | 329 | - | - | |
| Phco1g01052 | 331 | MobiDBLite | consensus disorder prediction | 25 | 51 | - | - | |
| Phco1g01052 | 331 | ProSitePatterns | EF-hand calcium-binding domain. | 303 | 315 | IPR018247 | - | |
| Phco1g01052 | 331 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
| Phco1g01052 | 331 | CDD | EFh | 266 | 318 | IPR002048 | GO:0005509 | |
| Phco1g01052 | 331 | SUPERFAMILY | EF-hand | 180 | 320 | IPR011992 | - | |
| Phco1g01052 | 331 | MobiDBLite | consensus disorder prediction | 161 | 175 | - | - | |
| Phco1g01052 | 331 | Pfam | EF-hand domain pair | 258 | 319 | IPR002048 | GO:0005509 | |
| Phco1g01052 | 331 | MobiDBLite | consensus disorder prediction | 107 | 180 | - | - | |
| Phco1g01052 | 331 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 194 | 213 | IPR003903 | - | |
| Phco1g01052 | 331 | SMART | efh_1 | 258 | 286 | IPR002048 | GO:0005509 | |
| Phco1g01052 | 331 | SMART | efh_1 | 294 | 322 | IPR002048 | GO:0005509 | |
| Phco1g01052 | 331 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 290 | 325 | IPR002048 | GO:0005509 | |
| Phco1g01052 | 331 | MobiDBLite | consensus disorder prediction | 66 | 86 | - | - | |
| Phco1g01052 | 331 | MobiDBLite | consensus disorder prediction | 139 | 160 | - | - |