Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g01050 ATGGCTTTCTTCCTTCACTGCTGCTGTTTGGAGCATAACAAGCCACAGATCCAGAAAGAAAAAGACAAGCTTTATGGATGCTCAAGTTTTCATCTTTGGAACCCTGCCAACCCCATTTGCTCAAAAATACCTGCTTTCAAACCGATGAAGGCCATGCCCTTTCCTTTTGAGGAGTTTCAAGGGAAGGGAGTGTTGGATTTTTCTTCAGCCTCAGATTCATTTTCATTTTTTTTGCATCATCCACAACCGAAGTGGACCATAGACGAAGAGGATTATTGCTATGTGGGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCAAACTCTTCCACCATGTCCTCTTCCCTTGGCAGTAGCAACACCATCAGCAAGGGTGGCAGTGGTGGTTCAACAAATAACACCACTTGTTACACCCCAACCCTTTCTCAGAACCCTCCTCAGACAGCATTGGAAACCAGCACAGAAAAATGTGGAGTGAGAATGGAGGACTGGGAAACTCAAGATCAATCCATTCTGAGACTAATCATGGCAGATGCTGAAGACCCTTCTGCAGGGTTGAGCAAGCTCTTCCAGGGAAGTGGCTGTGGCTCTCAGCAAACTGTTGATTTCAATGCAGGTTTTGGTGTTGTGGATCAAGGGTTGAATATGGTAAGTATTGTTGATCCTTCAGGGAATTACCCTGGTTTCCCTTTTATTGCTGAGAATATAGATGGCCAGAATGGTAAGACTGGTTCGTTGTCTGTTGGAGAATCAATGTTTTCTGTTTCTGGTAACAATTCTGTGTTGTTGTCAACATCTCCTGGTGGGTTTAATTCTCAGCAGCATGTAGTTGGAGAGGTGGATGAGAAGCCTCAAGTCATCAATCCCCAGTTTGAGTTAAACCAGACTCAAGTTCAATTCTCTGAGAACCCATCTTTCTTTGTGCCAATGATGTACCCCCAATTGCAGGAACAGCAAGTTTTCGCCCAGCATCCAGCAAAACGCCCCGTTTTTGAGACTGCTGGGCACAGTTATCAGGCTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAGGTGTTTGGTAGGAGGCAGCAAACACATCTTCCATTGTTTCCTCATCATATGCAACCACAGGTTGTGCCATCTGCTAAACCGCAGAAGGCGAGTTCCACCGGAGAAGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCAAATGCTCACAATGTCTTGGCTTTCTCACCCATCAGTTCCATTTTCAAAATTGGAGCATACAAGTCCTTTTCTGAGATATCACCTGTTATTCAGTTTGCCAACTTCACTAGTAATCAAGCAATCCTTGAAGCTTTGGAAAGGTTTGATCGAATTCACATTATAGATTTTGATATCGGGTTTGGAGTGCAATGGTCTTCTTTTATGCAAGCGCTTGCCATGAGGAGTAATGGTGTTCCTTCCCTCAAAATCACTGCCATTGTGTCACCCCTCACATATGATGAGTTTGAGCTCAATGTGACTCAAGAAAAGTTGAACCAATACGCCAAAGACATCAGCATGTCTTTTGAGTTCAATGTCTTAAGCATTGAGTCATTGAACACTCCTTCATGTCCACTCTCTGTTCAGTATTATGATAATGAGGCAACTGCTGTGAACATGCCACTTTCTTGTTTCACAAACTACCCAACATTGTTTCCCTTAGTCCTTCGCTTTGTGAAACAGCTTAGGCCAAAAGTGGTAGTCACTCTGGATAGAAATTGCGACCAACTTGATGCACCATTTTCCACAAACATAGTTCATGCTCTTCATTCTTACTCAGCCTTGCTTGAATCACTTGATGCTGTGAATGTGAACCTTGATGTCCTCCAAAAGATTGAAAAGCATTTCATCTTGCCAGCCCTTAAGAAGACCATAACAGGTCCCCTCCGTTCACAAGAAAAACTACCCTCTTGGAGGAACATGTTTCTTCAATATGGCTTCTCTCCATTCACATTTAGTAACTTCACAGAAGCTCAAGCTGAGTGTTTAGTGCAGAAGGCACCTGTAAGGGGATTTCAATTGGAGAGAAAACACTCATCTCTTGTTCTATGCTGGCAGAGGAAAGAACTTATCACAGTTTCAACTTGGAGATGCTGA 2274 0.4424 MAFFLHCCCLEHNKPQIQKEKDKLYGCSSFHLWNPANPICSKIPAFKPMKAMPFPFEEFQGKGVLDFSSASDSFSFFLHHPQPKWTIDEEDYCYVGSTEPTSVLDSRRSPNSSTMSSSLGSSNTISKGGSGGSTNNTTCYTPTLSQNPPQTALETSTEKCGVRMEDWETQDQSILRLIMADAEDPSAGLSKLFQGSGCGSQQTVDFNAGFGVVDQGLNMVSIVDPSGNYPGFPFIAENIDGQNGKTGSLSVGESMFSVSGNNSVLLSTSPGGFNSQQHVVGEVDEKPQVINPQFELNQTQVQFSENPSFFVPMMYPQLQEQQVFAQHPAKRPVFETAGHSYQAPRLPLLDSGQEVFGRRQQTHLPLFPHHMQPQVVPSAKPQKASSTGEDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNAHNVLAFSPISSIFKIGAYKSFSEISPVIQFANFTSNQAILEALERFDRIHIIDFDIGFGVQWSSFMQALAMRSNGVPSLKITAIVSPLTYDEFELNVTQEKLNQYAKDISMSFEFNVLSIESLNTPSCPLSVQYYDNEATAVNMPLSCFTNYPTLFPLVLRFVKQLRPKVVVTLDRNCDQLDAPFSTNIVHALHSYSALLESLDAVNVNLDVLQKIEKHFILPALKKTITGPLRSQEKLPSWRNMFLQYGFSPFTFSNFTEAQAECLVQKAPVRGFQLERKHSSLVLCWQRKELITVSTWRC 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g01050 757 ProSiteProfiles GRAS family profile. 390 756 IPR005202 -
Phco1g01050 757 MobiDBLite consensus disorder prediction 100 158 - -
Phco1g01050 757 Pfam GRAS domain family 401 756 IPR005202 -
Phco1g01050 757 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 372 752 IPR005202 -
Phco1g01050 757 MobiDBLite consensus disorder prediction 100 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g01050 Phco-Chr1 12037054 12039565 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco1g01050 GRAS 2.1e-93 CL0063