Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00992 ATGGCACAACTCAACCTCACATTGTTTGTTATTTTCCTCTCTCTCTTATTCTCATTTCTTGCTACCCCAGTTGAGCCATCATCATTGACAAGGCACAGAAATCCTAAAACTATGGCCTACATAGAGTCCTCTTGCAATGGCACCCTCTATCCCAATCTCTGCATCCGTTGTCTTGCACAATATGCCAAATCCTCCTTAAATGGCCCACAACACTTGGCTCAACATGCCCTCTCAGTGAGCCTCTCTAGGGCAGTCCAAACAAAAGGGTACCTTTTGAAAGTGGCAAAGGAACTTCAAGGCATCAAGAGCAACAAAAGAGAGTACCTAACAGTGCAAGATTGTGTGAACCAAATCACTGATAGTGTGGAACAAATAAGCCAAGCCATGAAAGAACTACGTAGGTTCAACCAACATGGATCAAGCATGAATGATAAGATGCTGTGGCACATAAGCAATGTTGAGACATGGGTGAGCACTGCTTTGACAGATGCTAGTAGTTGTGTGTACTCATTTCCTGGGCATAGGATGAGTAAGAGAATGGCTTCTATTAAGGTTAAGGCCATGAATGTTGCAGAAGTTACAAGTAATGTTCTTTTCTTGTTTCATAGATATGCATCAACCTACCAGAAAGCCACAATGACCACCAATAATTCCTAA 657 0.4231 MAQLNLTLFVIFLSLLFSFLATPVEPSSLTRHRNPKTMAYIESSCNGTLYPNLCIRCLAQYAKSSLNGPQHLAQHALSVSLSRAVQTKGYLLKVAKELQGIKSNKREYLTVQDCVNQITDSVEQISQAMKELRRFNQHGSSMNDKMLWHISNVETWVSTALTDASSCVYSFPGHRMSKRMASIKVKAMNVAEVTSNVLFLFHRYASTYQKATMTTNNS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00992 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 204 IPR035513 -
Phco1g00992 218 FunFam Pectinesterase inhibitor 3 36 205 - -
Phco1g00992 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 198 - -
Phco1g00992 218 Pfam Plant invertase/pectin methylesterase inhibitor 40 198 IPR006501 GO:0004857
Phco1g00992 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 204 IPR035513 -
Phco1g00992 218 SMART PMEI_2 36 200 IPR006501 GO:0004857
Phco1g00992 218 NCBIfam pectinesterase inhibitor domain 10 203 IPR006501 GO:0004857
Phco1g00992 218 CDD PMEI-like_3 43 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00992 Phco-Chr1 10200212 10200868 Tandem