Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00965 ATGGTGTATATAACACTGAAACTTGACACTGATGCTACAACTAAGAGTATCTCAGAGACCATTAAAGCTGAAGTTAGATCAGAAGCACACAGGAGTGAAGCAGAAGAGATGAGACAAGCTGATGCATATTCAGGGTTACTGTGTGGAGGGATATCAGGAAGGACAGGGCCCCACTCTCTGCCCTTGGCAAGGATAAAGAAGATCATGAAGAAGTCAGGGGAGGGTGTTAGAATGATATCAGGGGAGTCTCCAATTATTTTCTCCAAGGCTTGTGAACTCTTCATTCAGGAGCTTACTAGAAGGTCCTGGATCATTGCCCTCCAAGGAAAAAGGAGGACTTTGCACAAAGAGGACTTAACCTCTGCTGTTATAGCCACTGATCTATTTGACTTTTTGATCACTTTGGTTTCCAATTCTGACAGCCATGCACTTGGTGCCACCACCACTATCTTGGAGGTTGAAACTATAGACTAG 474 0.4409 MVYITLKLDTDATTKSISETIKAEVRSEAHRSEAEEMRQADAYSGLLCGGISGRTGPHSLPLARIKKIMKKSGEGVRMISGESPIIFSKACELFIQELTRRSWIIALQGKRRTLHKEDLTSAVIATDLFDFLITLVSNSDSHALGATTTILEVETID 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00965 157 Gene3D Histone, subunit A 10 138 IPR009072 GO:0046982
Phco1g00965 157 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 34 140 - -
Phco1g00965 157 SUPERFAMILY Histone-fold 50 132 IPR009072 GO:0046982
Phco1g00965 157 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 59 123 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00965 Phco-Chr1 9915894 9916367 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phco1g00965 CBFD_NFYB_HMF 4.9e-18 CL0012