Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00941 ATGGATTATGGAGGAAAGATTGGTGGAAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTGCACATTTTGCTGCAGTGCACAAGGTGTTTGGTGCAAGCAATGCCTCTAAGTTACTCATGAGAATCCCAGCTCACAAACGTCTTGATGCTGTTGTAACTCTTTGCTATGAGGCTTTAGCTAGGGCTAGAGACCCTGTTTATGGCTGTGTTGGTCACCTCTTTGCTCTTCAACAACAGGTGATGAACTTGCAGGCTGAGTTAACCTATGTCCAAGCCCGTCTTGCCACAATGCAGCGCATGCCAATGGAAGTAGCTCCTCTTCTACACCCTCAAAGTTCTTCACCACAAACACTTCCTTCCTCAGATCATTTGGCATCAAATGTTGACATGCAAAGTGTTCCTATTATGCACTATGATCCTCTTCAACCACATTCAGCGTCATTAGAGTTAAGCAGCATCCTTTTCAATCAATCAGATCAACAAGTGGAGGATAGGGAACTCCAAGCTCTGGCTCGAGAATTTGTGACCAAATACTTGCCCGGAGTAAGATTCCAGCAATCTAACTCTCCCTAA 639 0.4538 MDYGGKIGGSERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAELTYVQARLATMQRMPMEVAPLLHPQSSSPQTLPSSDHLASNVDMQSVPIMHYDPLQPHSASLELSSILFNQSDQQVEDRELQALAREFVTKYLPGVRFQQSNSP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00941 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 141 - -
Phco1g00941 212 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Phco1g00941 212 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00941 Phco-Chr1 9563642 9567292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco1g00941 LOB 2.5e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g02442 3 51019775 51023238 Phco1g00941 1 9563642 9567292 PCT