Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00884 ATGACTCATCAATCTTCTCGAGACGTTGATCTAAGCTTGGGAGAACCTAAGGGGCCCAAACTGGAGCCGGAGACGGAGGACCCTTCCGCCATACGTGTCATGCCGGTGGCTCTGCACGTCCCCTCCATCTCCATGTCCAAGGCCCTCGCCCAAGCCCAGGCCCAACCGCAGAAGCGGGCCTCCACCAAGGACCGTCACACCAAAGTCGAGGGCCGAGGCAGGAGGATCCGAATGCCCGCCACGTGTGCGGCGCGGATCTTCCAACTCACGCGAGAACTCGGCCATAAGTCTGACGGCGAAACCATCCGCTGGCTCCTTGAACACGCCGAGCCCGCCATCATAGCCGCCACGGGCACCGGCACCGTCCCCGCCATCGCCATGTCCGTCAACGGCACGCTCAAGATTCCGACCACCTCTCCCTCCGACCCAGAACTCGGAGACCCGCCCGAGAGGAAGAAGCGTAAGCGACCCGCCAACAGCGCCTACGTGGACGTAAACGACGGCGCAGTTTCAGTCCCCGCGGGCCTCACGAGCTCGACTAAGCAAAACACAAAGACAACCACCACGACCACCTCGACGACGACGACAATTCCGCAACACACCGCGATCCCGTTGCCGCAGGGCGTGGTCCCCGTGTGGGCCGTGCCTTCAAACGCCGTCGTTCCGACTGCAGGCGCGTTCTTCGTCGTCCCTCAAACCGCTTCCTTTCAGCAGCAGCCGCAGTTTTTTACCATAGCACGGCCCATCTCCGCGTTTGTCTCCTCCATGGTCACACCCGTTCAACTCCAACCAACCTCCACATCCTCTCCCGCAAACACTAACCCTTCCTCCACCACGCCGTCGTCGAAGTCCCCAGCTAGAGCCACCGTCATGGCTCCAACCACTACCACCACAACACACATGCTCAGAGACTTCTCGTTGGAGATTTACGACAAGCAAGAGTTGCAGTTCATGTCGCGCGCGTCTTCCAAGCATTGA 978 0.6084 MTHQSSRDVDLSLGEPKGPKLEPETEDPSAIRVMPVALHVPSISMSKALAQAQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDPELGDPPERKKRKRPANSAYVDVNDGAVSVPAGLTSSTKQNTKTTTTTTSTTTTIPQHTAIPLPQGVVPVWAVPSNAVVPTAGAFFVVPQTASFQQQPQFFTIARPISAFVSSMVTPVQLQPTSTSSPANTNPSSTTPSSKSPARATVMAPTTTTTTHMLRDFSLEIYDKQELQFMSRASSKH 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00884 325 MobiDBLite consensus disorder prediction 133 160 - -
Phco1g00884 325 MobiDBLite consensus disorder prediction 48 72 - -
Phco1g00884 325 MobiDBLite consensus disorder prediction 13 27 - -
Phco1g00884 325 MobiDBLite consensus disorder prediction 173 195 - -
Phco1g00884 325 Pfam TCP family transcription factor 61 177 IPR017887 -
Phco1g00884 325 ProSiteProfiles TCP domain profile. 62 116 IPR017887 -
Phco1g00884 325 MobiDBLite consensus disorder prediction 1 29 - -
Phco1g00884 325 MobiDBLite consensus disorder prediction 262 291 - -
Phco1g00884 325 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 39 287 IPR005333 GO:0003700
Phco1g00884 325 MobiDBLite consensus disorder prediction 145 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00884 Phco-Chr1 8545128 8546105 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco1g00884 TCP 3e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00884 1 8545128 8546105 Phco1g00884 1 8545128 8546105 ECH