Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00875 ATGGACGTGAAGGCTTTGGCGAAATCAAAGAGAAGTCACACGCAGCACCACAGCAAAAAGTCTCATCATAGCCACAAGCCCAAAGCTCAATCATCGTCTTCTTCGGACCCAAAGGACCCTGCGAAGAACCTACCGGGGAAGCAGCAAGTGAACGAGGAGAAGAAGAAGAAAAGCCACCGTTCTGTGCTTCCCTCGAATTGGGACCGCTATGGGGAGGAAGATGATGATTCCAGGCCCGAAATTGCTAGCAAAACCCTCGATGTTGTCTTGCCCAAAAGTAAAGGCGCCGAGTATCGCCACCTGGTTGCGGAGGCTCAGTCCCATGCGGAGACAAGTTTGGAAGGATTCCCTGCTTTTGATGATCTTCTTCTTGGGGAGTTTGGTGTGGGATTGAGCTCTATGCTTGCGTCCAGGGGAGAGGGCATCATCTTGTGGAATGGAGATGATAATTTCGTTGTAGAGGATAAGACAAGTGGAAATCAGGAGGCATCATTCTTGTCCCTGAATTTGCTTGCTCTAGCTGACAATTTTGCCAAGGTTGACTTATCAAAGAGATTATTCATTGAGTCTGACCTATTATCCACTGAGTTGTGTACGGAAGAATTGGCAGTGGACAGCAGCGAAGAACACAAGGAACTGGAAACTAAAGAGGACAATGAACTAGCCAATAGTATGTCTAAAGAATTCAATGTAGACAATCGTGCTACAGATCAATTTGCATCATCTACTTCCAGCAGTAGTAGCCCTGCTTCTTCTACATTTCCCTCGTCAAATGACTTTAACATTCCTGTGAATTCTGTCATTGCTGAATTTCAGCAAGCTAGCAGTAGTGGTAAACATAAAGCATTTGTTCTAAGTTCAGATGCTAGCTTACATTCCACTGAACATATGAGGGGGAAACAGTACTCCACATTTGAAGCTGCTGCTGCTGAAAAAGAACTAGATATGCTTCTAGATTCTCCAGTTTCATTGGGAGTATCTTCTGGGTATCCTCCGCAGATTTTGAAGAAAGATCCAGTTTCATCCAAAATTGCATCCACTACTGCTAGTCTAGATGATGCACTTGATGACTTGCTAGAGGAAACATCCACTTTGATAAAACCAAATGTTTTATTACTGCCACAGGAAGAAAAACCTGTCAATCACAGCATGAAATCTTCTTCACATCCTGGAAGCAAATCCAAAGTAACAGATGATTTTGATTCATGGTTGTCCCTTGGGTTTGTTCCCATTTCTGTGTGGTGTGGTTCGTTTGAAGGTTGGTTATTTATCGGACTTGGGGTTGTAGGTGATGACCCGGGGTGGTTATTGGAAGGGTCATTGGTTGAGACATTGGAGCAACGAAATCGTGGAAGACGTGTTACGAACCTTAGGGTTAGTCAAGAGGTTAGCACATCTAGACGAACTGAGAAGGGTATTCCGCTTGAGACTTCTCTTCGGGTTTATCGCAGGTATTTGAAGTATGATCCCTCTCACGTTGAGGATTTTATTGAGTTTTTGCTTAATTCCAGTCTCTGGCAAGAGGCTTCTGAGAGGATGGCTTCGGTGCTCAATGATGACCAGTTTTACTCCATTAAGGGGGTGGGATTAGGAAGTTCACTGACAAGGTGGGTGGGCTTTGGACTTAGCTTGCTGAGTATTACATTAGGAGGGGTTTGCATGAGAAGGCTAGGGATGTGTTTGAAGACGATGGAGGAGGAGATGGAGTTGAGTGATGAAGAAGATGGCTTTGAGGAAGTGGAAGAACAGAGTATTCCTTTCAGAGGTTTCAAAGGAAGATTGGAGGAGGAGGATTTTGAGAGGAAGATTTTACATGGGTTTTGGTTGAATGACAAGAATGACATAGACTTGAGGTTGGCTCGGTTTGATTACCTTATGCAGAGGAGGCCGGAGTTGGCTAACAGTGTGTTTTTGCGTCAAAATTCTCATAATGTCGAACAGTGGCAGAGGAGGGTGGAGCTCTATGAAGGGGATCCTATCAGTCAGGTACTGACTTACACCGAAGGGGTGAGGACGATTGATCCCATGAAGGCAGTGGGAAAGCCTCATACTCTGTGGGTTGCTTTTGCTAAGCTGTATGAGGAGCACAGAGATCTTGCCAATGCCCGTATCATATTTGACAAGGCAGTGCAGGTGAACTACAAAACTGTGGATAATCTGGTTAGTGTCTGGTGTGAGTGGGCTGAAATGGAGTTAAAGCATAGAAATTTCAGAGGAGCACTTGAGCTGATTAGGCGGGCTACAGCTGAGCCTTCTGTTGAGGTGAAGCGAAAAGTGGCTGCGGATGGGAATGAACCAGTCCAGATGAGGCTACACAAATCCTTGCGGTTGTGGAATTTTTATGTTGATTTGGAGGAAAGCCTGGGTTCTTTGGAATCTACGCGTGCGGTTTATGAGCGAATTTTAGATTTACGAATAGTCACACCACAAATACTGATCAATTATGCGTACTTTCTGGAGGAACATGATTACTTTGAAGATGCTTTCAAAATTTATGAAAGAGGAGTAAATATATTTAAGCACCCTCATGTTAAAGACATCTGGGTTACATATCTCTCTAAATTTGTGAAGAGATATGGAAAGAATAAATTGGAGCAAAAAAGAGAATTGTTTGAAAATGCAATAGAATCGGCCCCAGCTGATCAAGTGAAGCCACTTTACCTGCAATATGCCAAGCTGGAGGAGGACTATGGTCTAGCGAAGCGAGCTATGAAGATTGATGGTGACAATAAGATTGAAATTGTTCAAAAAGAGGTTCCTTTTGTGCTGTGTTGGGTGGTTTGA 2784 0.44 MDVKALAKSKRSHTQHHSKKSHHSHKPKAQSSSSSDPKDPAKNLPGKQQVNEEKKKKSHRSVLPSNWDRYGEEDDDSRPEIASKTLDVVLPKSKGAEYRHLVAEAQSHAETSLEGFPAFDDLLLGEFGVGLSSMLASRGEGIILWNGDDNFVVEDKTSGNQEASFLSLNLLALADNFAKVDLSKRLFIESDLLSTELCTEELAVDSSEEHKELETKEDNELANSMSKEFNVDNRATDQFASSTSSSSSPASSTFPSSNDFNIPVNSVIAEFQQASSSGKHKAFVLSSDASLHSTEHMRGKQYSTFEAAAAEKELDMLLDSPVSLGVSSGYPPQILKKDPVSSKIASTTASLDDALDDLLEETSTLIKPNVLLLPQEEKPVNHSMKSSSHPGSKSKVTDDFDSWLSLGFVPISVWCGSFEGWLFIGLGVVGDDPGWLLEGSLVETLEQRNRGRRVTNLRVSQEVSTSRRTEKGIPLETSLRVYRRYLKYDPSHVEDFIEFLLNSSLWQEASERMASVLNDDQFYSIKGVGLGSSLTRWVGFGLSLLSITLGGVCMRRLGMCLKTMEEEMELSDEEDGFEEVEEQSIPFRGFKGRLEEEDFERKILHGFWLNDKNDIDLRLARFDYLMQRRPELANSVFLRQNSHNVEQWQRRVELYEGDPISQVLTYTEGVRTIDPMKAVGKPHTLWVAFAKLYEEHRDLANARIIFDKAVQVNYKTVDNLVSVWCEWAEMELKHRNFRGALELIRRATAEPSVEVKRKVAADGNEPVQMRLHKSLRLWNFYVDLEESLGSLESTRAVYERILDLRIVTPQILINYAYFLEEHDYFEDAFKIYERGVNIFKHPHVKDIWVTYLSKFVKRYGKNKLEQKRELFENAIESAPADQVKPLYLQYAKLEEDYGLAKRAMKIDGDNKIEIVQKEVPFVLCWVV 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00875 927 MobiDBLite consensus disorder prediction 10 27 - -
Phco1g00875 927 MobiDBLite consensus disorder prediction 1 79 - -
Phco1g00875 927 Gene3D Tetratricopeptide repeat domain 767 918 IPR011990 GO:0005515
Phco1g00875 927 Gene3D Tetratricopeptide repeat domain 626 762 IPR011990 GO:0005515
Phco1g00875 927 FunFam Pre-mRNA-splicing factor syf1 616 762 - -
Phco1g00875 927 SUPERFAMILY TPR-like 767 906 IPR011990 GO:0005515
Phco1g00875 927 SUPERFAMILY TPR-like 618 749 IPR011990 GO:0005515
Phco1g00875 927 MobiDBLite consensus disorder prediction 48 79 - -
Phco1g00875 927 PANTHER PHOSPHORELAY PROTEIN 1 404 - -
Phco1g00875 927 SMART hat_new_1 697 733 IPR003107 GO:0006396
Phco1g00875 927 SMART hat_new_1 823 857 IPR003107 GO:0006396
Phco1g00875 927 SMART hat_new_1 862 896 IPR003107 GO:0006396
Phco1g00875 927 SMART hat_new_1 789 821 IPR003107 GO:0006396
Phco1g00875 927 FunFam Pre-mRNA-splicing factor SYF1 763 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00875 Phco-Chr1 8458274 8469129 Dispersed