Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00860 ATGGTCAGCTGTTATGAATTCCTGACATGGTCACATGCAAAGGCGTGGCTAGAGAAGCAATTGATTCAACTGAACTCGTACGAGGCAAGAGTTCGTGAAGTAGAAGATGTTGTGGAGAAGCTCAAGAAGAAGAGAGATACTGTTCAGCATACCGTTGACGAGGAAGAACGTCGACATGGAAGGAGAATTCACGTTGAAGTTAAAGAATGGATAGAGAGTGTGGATAAACTCATTCTCGCATATAAGGATTTCCACGAGGACGAAAATGGCCATAACTGTGCAGCGTTTGACTTTTTCGAAAGTGGTTACCTTCCGAAGCCGGGGATAAGGTATCATCTAAGTGAAAAAGCAGATGATATCACAAAGCAGGCAAATGGTTTACTGCAAAATACAAAGTTTGACATTTTGTCTTATTGGTCTGGGCCACCCTCCATGGCTGCATTGTTTTCAAACCTTGGTTATGAAAACTATACATCAAGAAATGACACTGTGAAAAAGATTACTGAAGAATTCCAAAAGCCAGGTGTTAGAATGATCGGTCTTCATGGGCTGAGTGGCGTTGGCAAGACCTCTCTAGTGAAAGAAGTTGTGAAGAAAGCCTTGAAAGATAAGATGTTCGAAGTGGTGACCATGGCAAGTGTGACAAAAAACCCTGACGTAAGAAAAATCCAAGGACAAATTGTTGATATGTTGGGGGTTGTATTGGAGGAGGAAAGTGACATTGCAAGAGCTGCTAGGATTCACGAGATATTGAATAATGAGAATAAGAGCACGCTTATAATCCTAGATGATCTTTGGGAAGAAGTGAACTTTAACCTGCTGGGGATTCCATCTGAATTAGAGAAAGATGATGGCGTAACAAATTTCAAAGGAAAATCCCTTGATGTTGATAGCTCCAAGAATGTCACTGATGGAAAATACCTCGGCGTTGATGGTTCGGCAAATAGCAAAACAGGAACGTTACACGGTGCTGATGGTTCCAAGAATGTCAACAAACGAAAATCCCCCGGCGCTCATGATAGTGTGAAGAGTGTCAAAAAAAGAGATATCCTTGGTGGTGGTTTGAAGAATGCCAATGAAGGAAAATCCCCCGTTGATGCTTCTGATCGGATGAAAACAGAGAAAACTGTTCCTCAGTACAAAGGGTGCAAGATTTTGATGATTTCTGAAATCAAACAAGTGTTATCAAGTCAAATGGAAGGGAAAGAAGAGTATATTTTCCCCGTGGAAATCTTAGAGGAGAAGGAAGGAGAGATGCTGTTCAAGAAAAAGGCTGGAATAGATGGCAAGAATTCTGAATTTGACAAATTAGCAGCTCAAATTGCAAAGAAGTGTAAAGGGTTGCCAATGACAATAGTTACCACTGCAAGGGCACTGAAAAATAAGAGCCTTTCTGTATGGGAGGAAACTAACCGAAAACTTGAATCTCAAAACTTAACTGGAGCACCTGAATTTTCTACAAAGTTGAGTTATGAGCTTTTGGATGAGGAACTCAAGCACACTTTCTTGCTTTGTGCTCGCCTGGGTCATGATGCATTGATTATGGACTTGGTCAAATATTGTATTGGTTTTGGTTTTCTTGGAGGAATGAACACAGCAAGGAAAGCCAGAGACAAAGTATATACGTTGGTTGCAAAGCTAAAAGAGTCAGGTCTGTTGTCTGACAGTTATTCAAGTGACCATTTTACCATGCTGGATACTGTTCGTACTGCAGCTTTGTCAATAGCATATAAGGAAAATCATCTATTTGCAATGACAAAGGGAAACGTAGATGAATGGCCTGATAAACTTGAAAGGTATGCTGCTATTTCCTTATATCATTGTGACTTCATTGAAGAGTTTCCCAGGAGAATAAACTATCCAAGACTTAGAGTCCTTCAAATTGTCAATAGTAATCCACGTCCTAAAATACCTAAAAACTTCTTCAAAGGAGTGAAAGAACTCAGGGTATTGATATTGACCGGTATTCATCTCTCCCTCATTGGTTCTTCAATTTCATGCTTGCATAAGCTTAGAATGCTTTGTTTGGAGCAATGCTGCATGCTGGATGAGAAATTATCCATCATAGGAGAGCTGAAAAAGTTAAGAATTCTTAGTTTTTCAGGATCTGATATTAAAAGTTTGCCAGATGAGTTAAATGAGTTAAAAATGCTACAAATTTTTGACATAAGTAATTGCTCTCAACTTAAAAGAATTCCAAATGGTGTCATATCAAGCTTGATAAGTCTGGAGGAGTTGTATATGAGAAATACCTTGATTCAATGGGAGGATGAAGAACAAACACGTCAAAGTAAAGTAGCTCTTCTTTCTGATCTGAAACATTTGAATCAATTGACAACTCTAGACATACAAATCCCAAATGTTTCCTACTTGCCAAGGAATTTGTTTTTTGACAAGTTATATAGTTACAAGATTGTTATTGGAGATTTGAGTTCATTTTTAGAGACTGATTTCAAGATGCCAGAGAAATATGAAACATTGAAATTTTTGGCAGTCTAA 2499 0.3878 MVSCYEFLTWSHAKAWLEKQLIQLNSYEARVREVEDVVEKLKKKRDTVQHTVDEEERRHGRRIHVEVKEWIESVDKLILAYKDFHEDENGHNCAAFDFFESGYLPKPGIRYHLSEKADDITKQANGLLQNTKFDILSYWSGPPSMAALFSNLGYENYTSRNDTVKKITEEFQKPGVRMIGLHGLSGVGKTSLVKEVVKKALKDKMFEVVTMASVTKNPDVRKIQGQIVDMLGVVLEEESDIARAARIHEILNNENKSTLIILDDLWEEVNFNLLGIPSELEKDDGVTNFKGKSLDVDSSKNVTDGKYLGVDGSANSKTGTLHGADGSKNVNKRKSPGAHDSVKSVKKRDILGGGLKNANEGKSPVDASDRMKTEKTVPQYKGCKILMISEIKQVLSSQMEGKEEYIFPVEILEEKEGEMLFKKKAGIDGKNSEFDKLAAQIAKKCKGLPMTIVTTARALKNKSLSVWEETNRKLESQNLTGAPEFSTKLSYELLDEELKHTFLLCARLGHDALIMDLVKYCIGFGFLGGMNTARKARDKVYTLVAKLKESGLLSDSYSSDHFTMLDTVRTAALSIAYKENHLFAMTKGNVDEWPDKLERYAAISLYHCDFIEEFPRRINYPRLRVLQIVNSNPRPKIPKNFFKGVKELRVLILTGIHLSLIGSSISCLHKLRMLCLEQCCMLDEKLSIIGELKKLRILSFSGSDIKSLPDELNELKMLQIFDISNCSQLKRIPNGVISSLISLEELYMRNTLIQWEDEEQTRQSKVALLSDLKHLNQLTTLDIQIPNVSYLPRNLFFDKLYSYKIVIGDLSSFLETDFKMPEKYETLKFLAV 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00860 832 Coils Coil 17 58 - -
Phco1g00860 832 PRINTS Disease resistance protein signature 252 266 - -
Phco1g00860 832 PRINTS Disease resistance protein signature 713 729 - -
Phco1g00860 832 PRINTS Disease resistance protein signature 178 193 - -
Phco1g00860 832 PRINTS Disease resistance protein signature 445 459 - -
Phco1g00860 832 SUPERFAMILY L domain-like 564 800 - -
Phco1g00860 832 Gene3D Ribonuclease Inhibitor 603 832 IPR032675 -
Phco1g00860 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 474 IPR027417 -
Phco1g00860 832 Gene3D - 411 495 IPR042197 -
Phco1g00860 832 Pfam NB-ARC domain 376 498 IPR002182 GO:0043531
Phco1g00860 832 Pfam NB-ARC domain 161 278 IPR002182 GO:0043531
Phco1g00860 832 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 32 812 - -
Phco1g00860 832 MobiDBLite consensus disorder prediction 327 350 - -
Phco1g00860 832 MobiDBLite consensus disorder prediction 313 374 - -
Phco1g00860 832 Gene3D - 152 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00860 Phco-Chr1 8194667 8197165 Tandem