Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00855 ATGGAGTATGTTAAATTGCTTGGTCCCTTGCTCGGTCCCGCGTGGCCATATCTAAAGCCGTTACTGCATAAACTTTTGCCTTACGAAATCAGAGTTGGAGAACTAGCCAAAGATGTTACTAAGCTGCGGAAGGTGAAAAGCAAGGTGCAACATAAAGTTAAAGATGAAGAAAATCGAAATGAAAGAGCTATTGATGATGGTGTTATAAGATGGTTGGAAGAGGTAGATGTGGTCGTTTCTGACTATGAGGATTTCTTGGAAGATGAAGACCGTCCTTATGCCGTGTGCTCCGATGGTTACCTTCCTAAACCTGCCATAAGGTGTCGTCTAAGCAAAATAGTGAATGATATTGCAGGGAGGGTTGGTGTACTACTGCAGACCTCAAATGATGATGACTTCTCTTGTTGGTTGGGGCCACCTTCCTATGATGCTGATTTTGATAACATTAGGTATGAAATGTTTGAATCAAGAAATCAAACTATGGGTGGTATTATGGCAGCATTGGCAGACTCGAAGGTTGGAGTGATTGGAGTTTATGGGTGGAGTGGTGTGGGGAAGACTAGTTTGATCAAAGAAGTTGCTAAGAAGGTAAAAGGCAACATGTTCGATGTTGTGGTCATGGTGAACGTAACAAGTCGTCCTGACATAAGAAGAATTCAAGGACAAATTGCTGAGAAGTTGGGGATGAAATTGGAAGGGGAATCTGAGAGTGGAAGAGCAGCACAGTTAGGAGAGAGATTGAAGGACCCGAAGGAGAAAACCCTTATAATTCTAGATAATATGGGGGTGAAACTGGATTTCAATATGTTGGGAATTCCATCCAAGAACAATGATGATAGCCAGATGAATCACAAAATGAAAGACCTTTCAGCTCGCCGCAGTTATGCATTGAAAACTGAAGAATTTGATGCTTCCATTTTGAGGAAGGTAGAAGATCCTCTTGCTAGATACGAAGGATGCAAAATTTTGATGATTTCCAAGAGTGAACAGCTTTTGTTAAGTCAGATGGATGGAAAAGCAATTCAAACTTTTTGTGTAAAAGCATTAACGGAAAAGGAAGCAGAGACAATGTTTAAGACTATGTCTGAAATAGACAATGAAAATTCTCTGTTTAAAGCATTAGCAGCTCAAATTTCAAAAAAATGTATAGGGTTGCCCATGACAATTGTAGCAACTGCAAAGGCCTTAAAAAACAAAAGCCTTCCGGTGTGGGAGGATGCTTATCGAAACCTTGAAAGGCAAAACTTAATAGCAGTGCCAGAATTTTCTACAAAGTTGAGTTATAATCTTCTAGAAAATGACGAGCTCAAACACACTTTGTTAGTTTGTGCTCGAATGAGCCATGATGCATTGCTTACCGACTTGGTGAGAAACTGCATTGGTTTAGGTTTACTTCAAGGAATTTACACTGTTAGGGAAGCCAGAGATAGAGTACATGCATTGGTTGGAGAGTTGAAGGAGTTAAGTTTGTTGTCTGATAGTTTTTCAAGTGATCGTTTCACCATGCAAGATATTATCCGGGATGCAGCTTTGTCAATAGCATCACAACAGATGCATACATTTGCACTAACAAAGGGAAAACTAGAAGAATGGCCTGACATGGACAAGCTTGAAAGGTACACTGCTATTTCCTTACAGCATTGCGATGTCACTGACATCATGAAGAAGTTTCCTGAAAGCATAAACTGTTTTAGACTTAGAGTCTTCCATCTTGACAACAAGGATCCACATCTGGAAATTCCCGACAACTTTTTTACTGGAATGAAAGAACTCCGGGTGTTGATATTGATTGGCGTTCGTCTATCATGTTTACCTTCATCAATTCAATGCTTGAAAAAGATCAGAATGCTTTGTTTGGAGCGGTGCAAGTTAGGTGAGAATTTATCTATGATTGGAGAGTTGGAGACACTAAGAGTTCTGAGTTTATCAGGATCTGATATTGATAAATTGCCAGCCAAATTGTGCAAGTTAGCTAAGCTACAAATTATTGACATAAGTAATTGTTTTAAACTTAGAGAGATTCCTGCTGGTGTGTTGTCAAGTTTGGCTGGTTTAGAAGAGTTTTATGTGGGAAATAGCCCAATTCATTGGATAGATGAGGGACAGGGAAATGCTAGTCTTTCTGAGCTGAGGCAATTGGATCAATTAACAACACTAGGCATACAGATCCCAGAAATTACCCATATGCCTAAGAACTTGTTCTTTGACAAGTTGGATAGGTACAATATTGTCATTAGAGATTCCAATTCTTATTCCGTATGGGATATTAAGATGCTAGAGATGTGTGAAACATCAAGATTTTTGGCACTTCAACTAGAAAACGGGTTTGACATTCACCATCAAAAGAACATCAAAATACTATTCGAAAGAGTTGAAAACTTGTTGTTGGGACAGCTAAATGATGTTGAAGATATTTTCTGTGAATTGAATTATGAAGGATTTCCATATCTAAAGTATTTGTCCATTGTGAGTAACTCGAAAGTTAAGTCCATCATCAATTCAGAGAACCAAAAACATCTTGAGAAAGTATTTCCCAAATTAGAGTCATTGTTTCTTTATGAAGTCAACAACATGGAGCATATATGCTACAGTCAACTTACCAGTGATTCGTTCTGCAAATTGAAAATTATCAAGCTTAATATGTGTGGTCAATTAAAGAATGTCTTCTTCTCTTCTACAATCAAACATCTTTCTGCACTTGAATCAATTGAAGTTTCTGAGTGTAACACTCTGAAGGAGATTGTTACCTCAGAAGTGGAAAACAGAGGAGGACAAATTAGGTTTCCTGAATTGCGTTCTTTGACACTAAAATCTTTGTCTGAATTGATTGGATTCTACACCAATGGTGCATCACCAGAAGAGCAAGTGTCAAATGAACTCTTTGATGAAAAGGTATATATATGA 2904 0.3833 MEYVKLLGPLLGPAWPYLKPLLHKLLPYEIRVGELAKDVTKLRKVKSKVQHKVKDEENRNERAIDDGVIRWLEEVDVVVSDYEDFLEDEDRPYAVCSDGYLPKPAIRCRLSKIVNDIAGRVGVLLQTSNDDDFSCWLGPPSYDADFDNIRYEMFESRNQTMGGIMAALADSKVGVIGVYGWSGVGKTSLIKEVAKKVKGNMFDVVVMVNVTSRPDIRRIQGQIAEKLGMKLEGESESGRAAQLGERLKDPKEKTLIILDNMGVKLDFNMLGIPSKNNDDSQMNHKMKDLSARRSYALKTEEFDASILRKVEDPLARYEGCKILMISKSEQLLLSQMDGKAIQTFCVKALTEKEAETMFKTMSEIDNENSLFKALAAQISKKCIGLPMTIVATAKALKNKSLPVWEDAYRNLERQNLIAVPEFSTKLSYNLLENDELKHTLLVCARMSHDALLTDLVRNCIGLGLLQGIYTVREARDRVHALVGELKELSLLSDSFSSDRFTMQDIIRDAALSIASQQMHTFALTKGKLEEWPDMDKLERYTAISLQHCDVTDIMKKFPESINCFRLRVFHLDNKDPHLEIPDNFFTGMKELRVLILIGVRLSCLPSSIQCLKKIRMLCLERCKLGENLSMIGELETLRVLSLSGSDIDKLPAKLCKLAKLQIIDISNCFKLREIPAGVLSSLAGLEEFYVGNSPIHWIDEGQGNASLSELRQLDQLTTLGIQIPEITHMPKNLFFDKLDRYNIVIRDSNSYSVWDIKMLEMCETSRFLALQLENGFDIHHQKNIKILFERVENLLLGQLNDVEDIFCELNYEGFPYLKYLSIVSNSKVKSIINSENQKHLEKVFPKLESLFLYEVNNMEHICYSQLTSDSFCKLKIIKLNMCGQLKNVFFSSTIKHLSALESIEVSECNTLKEIVTSEVENRGGQIRFPELRSLTLKSLSELIGFYTNGASPEEQVSNELFDEKVYI 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00855 967 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 34 945 - -
Phco1g00855 967 Pfam NB-ARC domain 307 419 IPR002182 GO:0043531
Phco1g00855 967 Pfam NB-ARC domain 159 275 IPR002182 GO:0043531
Phco1g00855 967 SMART AAA_5 172 370 IPR003593 GO:0016887
Phco1g00855 967 SUPERFAMILY L domain-like 502 912 - -
Phco1g00855 967 Gene3D - 148 340 IPR027417 -
Phco1g00855 967 PRINTS Disease resistance protein signature 175 190 - -
Phco1g00855 967 PRINTS Disease resistance protein signature 382 396 - -
Phco1g00855 967 PRINTS Disease resistance protein signature 655 671 - -
Phco1g00855 967 PRINTS Disease resistance protein signature 248 262 - -
Phco1g00855 967 Gene3D - 348 432 IPR042197 -
Phco1g00855 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 443 IPR027417 -
Phco1g00855 967 Coils Coil 46 66 - -
Phco1g00855 967 Gene3D Ribonuclease Inhibitor 556 948 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00855 Phco-Chr1 8130573 8133476 Dispersed/Wgd