Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00846 ATGGATTGGTGTGTGAGGGCGAGAAAGAAGGCGCTGAAATCAATTGAAGCAAGGGGCATGACTCATCTGATTGAGGATTTGATTACTGTTAAGAAGAAAAAGAAGGACAAGAAGAAGTTGGAAAGCAAGAAGAAAATAGTTAAGAAAATTGAAAATGTAGAAGATCTTGACCTTAGTTTGGAGGAAGACTTCCTACAGCCTATGCAACCTGTGAATGATGTTGATGATTTGAAAAGGAAAGTGAGTACGTTTTCCAATGGAATGTTTATAGAAAAGAAGGAAAAAACAATGGAAGAATTTGTCAATAGGCTTTCTCAATTCTCGGGGCCATCTGATCATAGAAAAGAAGTCAATTTGAACAAAGCAATCACAGAAGCACAGACTGCAGATGATGTTTTAGAGGTAACTTATGAAACAATTGTTGCAGTTGCAAAAGGTCTAAGTCCCTCTCCTCTGTCCCCCTTGAACATTGCTACTTCTCTTCATCGAATTGCTAAGAATATGGAGAAGGTTACCATGACGAGAACTCGAAGACTGGCTTTTGCTCGACAAAAAGAGATGTCTATGCTTGTGAGTGTTGCGATGACAGCCTTACCTGAGTGCTCTGCTCAAGGAATCTCTAACATATCCTGGGCACTGTCTAAAATTGGAGGTGAACTGCTTTATCTTTCAGAAATGGATAGAATTGCAGAGGTTGCACTGACCAAGGTTGGGGAATTCAACTCCCAAAACATTGCTAATATAGCAGGTGCCTTTGCTGCAATGCAGCATTCTGCTCCTGATCTTTTTTTAGAGTTGTCGAAAAGGGCATCAGACATAATTCACACTTTTCAAGAACAAGAGCTAGCTCAACTGTTGTGGGCTTTTTCTTCTCTGTATGAGCCAGCTGACCTTGTATTTGATTCTTTAGACATAGTCTTCAAAGATAGTTGCCAATTGAGAGGTTGCACAAGTGAAAAGACATCAAATAATGATGGACAAATCAGTGTTCACAGAACAGGTGCCTCAAATGGATCTCTTAACTCTCCTGTTCTCACTTTAACAAGGGACCAGCTTGGTAGTATAGCTTGGTCCTATGCCGTCTTTGGACAAATGGATAGGAGTTTCTTCGCTCATGTCTGGAAAACTCTCCGCCATTATGAGGAGCAAAAGGTTTCAGAGTTTTATAGGGAGGATATCATGTTTGCTTCTCAAGTTCATCTTGTAAACCAGTGCTTGAAGCTTGAATTCCCATATCTTCAGTTGTCACTATGTGGTGAGTTTGAGGATAAAGTTGCTCTTGCTGGAAAAACTAAAAGGTTTAATCAGAAAATAACTTCATCGTTTCAAAAAGAGGTTGGACGCCTACTCATAAGCACTGGCCTTGAATGGGTTAAAGAATATGTTGTGGATGGTTACACTTTGGATGCTGTGCTTGTTGATAAGAAGCTTGCTTTGGAGATTGATGGTCCAACACATTTCTCAAGAAATACTGGTGTTCCATTAGGACATACCATGTTAAAACGCCGATATATTACTGCTTCTGGTTGGAAAGTCGCATCAGTATCCCATCTGGAGTGGGAGGAAACTCAAGGGGCGTTTGAGCAAGTAGAGTACCTTAGGAACATCCTCAAAAATCATCTAGGTGAAGGGTATGTCGAAACTATCTAA 1650 0.4036 MDWCVRARKKALKSIEARGMTHLIEDLITVKKKKKDKKKLESKKKIVKKIENVEDLDLSLEEDFLQPMQPVNDVDDLKRKVSTFSNGMFIEKKEKTMEEFVNRLSQFSGPSDHRKEVNLNKAITEAQTADDVLEVTYETIVAVAKGLSPSPLSPLNIATSLHRIAKNMEKVTMTRTRRLAFARQKEMSMLVSVAMTALPECSAQGISNISWALSKIGGELLYLSEMDRIAEVALTKVGEFNSQNIANIAGAFAAMQHSAPDLFLELSKRASDIIHTFQEQELAQLLWAFSSLYEPADLVFDSLDIVFKDSCQLRGCTSEKTSNNDGQISVHRTGASNGSLNSPVLTLTRDQLGSIAWSYAVFGQMDRSFFAHVWKTLRHYEEQKVSEFYREDIMFASQVHLVNQCLKLEFPYLQLSLCGEFEDKVALAGKTKRFNQKITSSFQKEVGRLLISTGLEWVKEYVVDGYTLDAVLVDKKLALEIDGPTHFSRNTGVPLGHTMLKRRYITASGWKVASVSHLEWEETQGAFEQVEYLRNILKNHLGEGYVETI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00846 549 Gene3D VSR Endonuclease 438 541 - -
Phco1g00846 549 ProSiteProfiles RAP domain profile. 477 535 IPR013584 -
Phco1g00846 549 SMART RAP_3 479 536 IPR013584 -
Phco1g00846 549 PANTHER FAST LEU-RICH DOMAIN-CONTAINING 112 534 - -
Phco1g00846 549 Pfam RAP domain 479 535 IPR013584 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00846 Phco-Chr1 8039595 8042003 Dispersed