Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g00838 | ATGCCCAATCTCGAGTTCACGCTTCTCTCAGCGGAAGGTCTCCACCTCAGGGGGAAACCCGCCAACAAGGATGTCTTCGTGGTGGTTCGCGCCGACTCCATTGCGAGCCACACCACGGCGACGGCGACGGGGAGCAACGGGTCGCTGTCGTGGAATGAGGCGTTCATGGTGGAGGTGGGGCCGCACGCGAGATGCGTGACGATTGAAGTGAAGTGCAGGACGGGAGCGGGAGAGAGAGACGTTGGCGTGGCAAGAATCGCGCTTTCGGATTTTCTTGGAGGGTCGGGGCCCGATTTGCAGGTTATGTGCTACAGGTTGAGGGACTGGGATGGGAGAGAAAACGGGATCGTTAATTTCTCCGTCAGAATGGTGTCGCCGACGCCGTCTCCACCTCAAGCCACCGCCGATGAGAATGATTGTGAGTCATCGTTGGGTTGA | 438 | 0.589 | MPNLEFTLLSAEGLHLRGKPANKDVFVVVRADSIASHTTATATGSNGSLSWNEAFMVEVGPHARCVTIEVKCRTGAGERDVGVARIALSDFLGGSGPDLQVMCYRLRDWDGRENGIVNFSVRMVSPTPSPPQATADENDCESSLG | 145 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g00838 | 145 | Gene3D | C2 domain | 2 | 124 | IPR035892 | - | |
| Phco1g00838 | 145 | MobiDBLite | consensus disorder prediction | 123 | 145 | - | - | |
| Phco1g00838 | 145 | ProSiteProfiles | C2 domain profile. | 1 | 101 | IPR000008 | - | |
| Phco1g00838 | 145 | PANTHER | INGRESSION PROTEIN FIC1 | 3 | 132 | - | - | |
| Phco1g00838 | 145 | SMART | C2_3c | 3 | 100 | IPR000008 | - | |
| Phco1g00838 | 145 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 133 | IPR035892 | - | |
| Phco1g00838 | 145 | CDD | C2_SRC2_like | 4 | 119 | IPR044750 | GO:0006952 | |
| Phco1g00838 | 145 | Pfam | C2 domain | 3 | 95 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco1g00838 | Phco-Chr1 | 7797565 | 7798002 | Dispersed |