Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00756 ATGACTTCTCCATATATCCCTCGCCGGCGAGCCGGCTCCGACCATAGCAGTACGCCGGGAAGAGTGCCCCCTTCTCCGGGCTACGCCTCCTCCGAGCTCAGCACCTCCACAGTCACAGCGCGCCAGAACCCCGTCGCCGCCGCCGCAAGGTTCTTCACCGGAATGTTCGCCGCGTGCTTATCGCCGCCGGAATTGGACAACTCCAAGAGCATCGGGGATTCCGAGGAGTTTAAGTCTTCTTCCACTGCATCGAATGGTTCAAGAGCTGGTAGTAGGAGAGGGCGTGGCTCAAATGGAAGTATGAGCCTCAGTTCATACAACATAGTACAAAAGAAAGAACCTGGCATTGTGAAGTTCACCATGGAGGAAATCTACCAAGTCACGAGAAATTTCTCCCATTCTTTCAAGGTTGGTCAAGGTGGTTTTGGTGCTGTGTACAAGGCAAAGCTCCTGGATGGGTCTGTTGTTGCAGTAAAGCGTGCTAAGAAGAGTCTATATGAGAAGCATTTGGGGGTGGAGTTCCAGAGCGAGATCCAAACACTATCCCGGGTGGAACATTTGAACTTGGTCAAGTTCTATGGATATTTGGAGCAAGGGGATGAAAGGATCATTGTCGTTGAGTATGTTCCAAATGGAACCCTCAGAGAACATTTAGATTGCATTCATGGAAGCGTTCTGGACCTTTCTGCACGTCTGGAAATAGCAATTGATGTTTCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACATAAAATCTTCGAACATTCTTCTCACTGAACATTTTCGAGCTAAAGTAGCAGACTTTGGTTTTGCTAGACAAGCCCCAGACAGTGACTCTGGCATGACCCATGTTTCCACCCAAGTCAAAGGAACAGCTGGCTACTTGGATCCTGAATACCTGAAAACTTATCAACTAACTGAAAAGAGTGATGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACCGGCAGACGCCCCATTGAACCAAAATTTGAACTCAAGGAGCGAATAACGGCAAAGTGGGCTATGAAGAGGTTCATAGATGAAGATGCTATCTCGGTCTTGGACCCAAGACTGGATCAGACTGCTGCAAACACTTTGGCACTGCAAAAGATTCTGGAGCTAGCTTTACAGTGCTTGGCTCCACGTAGACAAAACAGGCCTACTATGAAAAGATGTGCCGAGATCCTTTGGGCCATCCGCAAGGATTTCAGAGAGGTGTTATCAGCTTCAAACTTTCACTCATATTCCTCTACTTCCCAAAGGAGCACCTCACTGAGAGAGTGA 1314 0.4734 MTSPYIPRRRAGSDHSSTPGRVPPSPGYASSELSTSTVTARQNPVAAAARFFTGMFAACLSPPELDNSKSIGDSEEFKSSSTASNGSRAGSRRGRGSNGSMSLSSYNIVQKKEPGIVKFTMEEIYQVTRNFSHSFKVGQGGFGAVYKAKLLDGSVVAVKRAKKSLYEKHLGVEFQSEIQTLSRVEHLNLVKFYGYLEQGDERIIVVEYVPNGTLREHLDCIHGSVLDLSARLEIAIDVSHAITYLHMYIDHPIIHRDIKSSNILLTEHFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKRFIDEDAISVLDPRLDQTAANTLALQKILELALQCLAPRRQNRPTMKRCAEILWAIRKDFREVLSASNFHSYSSTSQRSTSLRE 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00756 437 PANTHER OS01G0750732 PROTEIN 55 421 - -
Phco1g00756 437 MobiDBLite consensus disorder prediction 74 104 - -
Phco1g00756 437 SMART serkin_6 131 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00756 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Phco1g00756 437 MobiDBLite consensus disorder prediction 1 36 - -
Phco1g00756 437 ProSiteProfiles Protein kinase domain profile. 131 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00756 437 Gene3D Transferase(Phosphotransferase) domain 1 209 428 - -
Phco1g00756 437 SUPERFAMILY Protein kinase-like (PK-like) 107 409 IPR011009 -
Phco1g00756 437 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 209 420 - -
Phco1g00756 437 Pfam Protein kinase domain 135 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00756 437 MobiDBLite consensus disorder prediction 68 104 - -
Phco1g00756 437 ProSitePatterns Protein kinases ATP-binding region signature. 137 163 IPR017441 GO:0005524
Phco1g00756 437 Gene3D Phosphorylase Kinase; domain 1 94 208 - -
Phco1g00756 437 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 89 208 - -
Phco1g00756 437 MobiDBLite consensus disorder prediction 18 36 - -
Phco1g00756 437 CDD STKc_IRAK 137 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00756 Phco-Chr1 6944459 6947595 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Phco1g00756 Pkinase 3.7e-50 CL0016