Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00736 ATGGCAGCTGTTAGGGCTTCCTCTGTAAGACGAATAGGAAGCACAATCAATGTTTCCTTCAATATGGAATTAGTTCAGCGCTGTCACTATCACCATAGTGTGTGTGTGAACCTTGCAAGGTTGCCAAGTGATTCACCTAGTCATCCTTATTACAAAAGAGAGTTACAGTCTGCTAAGAATCGGTTTAGTAATTTGGCTTCTGAATCCTTTGGAAGTAGTCACCAATTTGGTACTAGAGCCAATTTATCGTTTAAACCTGCCTTCTTTAGCTATTGTTTTCGGAGTGCCCTTCCTTTTGCTTCCGCGAGCCACGTGTTGAATCGCCGATCTTATTCGTCGACGGTGGGTGGTGATAAAGGAAGTAGAGATGCTGGTACAGAAGTCGCGGCTGGTTCTGGTGCGAGTGACATGAATACCACTGGTGATTCTGTTGTTGGGGGTGATTGGGCTGAGAGGATTAAAGATGCTTGGAAGAGTATGGTCGAGTCGGCATCGTATGCTGGGGAAAAGGTTAAAGCAACATCTGATGATCTCACTCCATATGCTCAGCAGTTGCTTGATTCACACCCATATTTAGACAAGGTGGTTATTCCAGTTGGTGGTACTTTAACTGCTACTCTAATAGCTTGGTTCTTGATGCCTATGATTTTGAGGAAATTTCACAGATATGCAATGCAAGGTCCCGTTTCTCTATTGCCAGCAAGCATATCTGGAGATCCAGTTCCTTATGAGAAAAGCTTTTGGGGTGCCATGGAGGATCCTGTGCGATATTTAGTTACCTTCATGGCATTCTCACAAATTGGTGTAATGGTAGCTCCAACAACTATAACCGCAGAATATCTAGCACCAGTTTGGAGGGGTGCAGTGATAGTTTCGTTTGTATGGTTTTTGCATAGATGGAAAACAAACGTTTTTGCACGGACATTGGCCAGTCAAAATTTACTTGGACTTGATAGGGAGAAAGTGCTCGCTCTAGACAAAATCTCATCTATTGGTCTATTTGTGATTGGTATAATGGCTTTTGCTGAGGCTTGTGGTGTGGCCGTGCAATCTATTGTTACTGTTGGTGGTATAGGAGGAGTGGCTACTGCTTTTGCTGCCAAGGACATTCTTGGCAACGTGTTTAGTGGTTTATCTATGCAGTTTTCTAAGCCTTTTTCAGTTGGAGATACAATAAAAGCAGGCTCGATAGAGGGTCAAGTGGTGGAAATGGGTCTTACTACCACGTCTTTGCTGAGTTCAGAGAAGTTTCCAGTCATTGTTCCAAACTCATTTTTTTCTAGCCAGGTTATTGTGAACAAATCCCGTGCTGAATATCGTGCCATTATAAGCAAAATTCCTCTGCAAACTGAGGATTTAAGTAAGATTCCCCAAATTTCAGATGATGTAAAAAGCATGCTCAGATCAAATGCAAAGGTTTTCCTAGGGAAAGATGTTCCCTACTGTTTCTTATCCCGTATAGAAAGTTCATTTGCAGAATTGACTCTTGGATACAACCTCAAACATATGCGCAAAGATGAACTATACTCGGCTGAACAAGAAATTCTGCTGCTGGCAGTTCAGATCATAAAAAATCATGGGGTTGCTCTTGGCAGCACATGGCAAGAAATGCCTTCTAAATGA 1623 0.4245 MAAVRASSVRRIGSTINVSFNMELVQRCHYHHSVCVNLARLPSDSPSHPYYKRELQSAKNRFSNLASESFGSSHQFGTRANLSFKPAFFSYCFRSALPFASASHVLNRRSYSSTVGGDKGSRDAGTEVAAGSGASDMNTTGDSVVGGDWAERIKDAWKSMVESASYAGEKVKATSDDLTPYAQQLLDSHPYLDKVVIPVGGTLTATLIAWFLMPMILRKFHRYAMQGPVSLLPASISGDPVPYEKSFWGAMEDPVRYLVTFMAFSQIGVMVAPTTITAEYLAPVWRGAVIVSFVWFLHRWKTNVFARTLASQNLLGLDREKVLALDKISSIGLFVIGIMAFAEACGVAVQSIVTVGGIGGVATAFAAKDILGNVFSGLSMQFSKPFSVGDTIKAGSIEGQVVEMGLTTTSLLSSEKFPVIVPNSFFSSQVIVNKSRAEYRAIISKIPLQTEDLSKIPQISDDVKSMLRSNAKVFLGKDVPYCFLSRIESSFAELTLGYNLKHMRKDELYSAEQEILLLAVQIIKNHGVALGSTWQEMPSK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00736 540 SUPERFAMILY Sm-like ribonucleoproteins 369 434 IPR010920 -
Phco1g00736 540 Pfam Mechanosensitive ion channel 327 529 IPR006685 GO:0016020|GO:0055085
Phco1g00736 540 Gene3D - 385 433 IPR023408 -
Phco1g00736 540 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 149 533 - -
Phco1g00736 540 Gene3D - 280 384 - -
Phco1g00736 540 MobiDBLite consensus disorder prediction 112 137 - -
Phco1g00736 540 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 282 368 IPR011014 GO:0016020