Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00723 ATGTCAGTGTACGACGCAGCTTTCGTCGATACAGAGCTTTCCAAACGCACTTCCATCTTTGGCCTCCGTCTCTGGGTCGTCATCGGCATCCTCGTCGGATCCCTCATCGTCATAGTCCTCTTTCTCCTGTCCCTCTGCCTCACCTCCCGCCGCCGCCACCACCACCACAAAACTCCCCTCCGCCGCAGCGCCGCCGCCGTCCCCACGCCGCCCATCTCCAAGGAAATTCTGGAGATCGTTCACGTTCCCCTGCCGCCAGACGCCGTCAACCTCCCGCCTCCGAAGGCGGAGCCCCGCGCCGCCGCCGTTCTGTACTCCAGTGGGGAGAGTAGGGGAGCTGTGAGCTTGTGCGAAACGGCGTCGTCACTGGGAAGCGGGAGTGTGGGCCCCGAAGTGTCGCATCTCGGGTGGGGGAGGTGGTACACGCTGAGGGAACTCGAAGCTGCGACTAATGGGTTGTGTGAAGAGAACGTGATTGGTGAAGGTGGCTATGGAATCGTGTATCGTGGGTTGTTGCCCGACGGAAACAAGGTTGCTGTTAAGAACCTTTTGAATAATAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGTAATTGGTCGTGTGCGGCATAAGAATCTTGTTAGGTTGCTTGGATACTGTGTTGAGGGGGCGTACAGGATGCTTGTATATGAATATGTTGACAATGGGAATCTAGAACAGTGGCTGCACGGGGATGTTGGAACTGTAAGCCCTATAACTTGGGATATCCGAATGAACATTATACTGGGCACAGCAAAAGGACTGGCCTATCTTCATGAGGGTCTTGAGCCCAAAGTTGTCCACCGAGACGTGAAATCGAGCAACATACTGCTTGATCGCCAATGGAACCCAAAGGTTTCTGATTTTGGGCTTGCGAAGCTTTTGTCTGCTGATCATAGTTATGTCACTACTCGAGTGATGGGCACCTTTGGTTATGTTGCACCTGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTGTATAGTTTTGGGATACTTATCATGGAAATAATTACGGGAAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTTAATTTAATAGAGTGGCTGAAAAGTATGGTTGGGAATCGAAAATCTGAGGAAGTAGTTGATCCTAAGCTTGCTGAAAAGCCATCTTCAAGGGCTCTTAAACGGGCTCTTTTGGTTGCTCTTCGATGTGTCGACCCTGATGCTGCAAAGAGGCCAAAAATAGGACATGTTATCCACATGCTCGAGGCTGAGGACCTCTTATTCCGTGATGAACGAAGGATTGAGGGAGAATCTTCCCGTTCCCATCGTGATTATCAACTGGAGCATAAAGGCTCTGGATTAGATAAAAGGCAGACAGGTGGAGAGATCAACAATCAGATTGAAGATGACAGCACTAGTAGTAGTAGTAGTAGATATCACCATCAGCCTTCTAGATGGAGATAA 1473 0.5017 MSVYDAAFVDTELSKRTSIFGLRLWVVIGILVGSLIVIVLFLLSLCLTSRRRHHHHKTPLRRSAAAVPTPPISKEILEIVHVPLPPDAVNLPPPKAEPRAAAVLYSSGESRGAVSLCETASSLGSGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGLLPDGNKVAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGTVSPITWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLSADHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIEWLKSMVGNRKSEEVVDPKLAEKPSSRALKRALLVALRCVDPDAAKRPKIGHVIHMLEAEDLLFRDERRIEGESSRSHRDYQLEHKGSGLDKRQTGGEINNQIEDDSTSSSSSRYHHQPSRWR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00723 490 MobiDBLite consensus disorder prediction 440 459 - -
Phco1g00723 490 PANTHER OS01G0323000 PROTEIN 8 444 - -
Phco1g00723 490 CDD STKc_IRAK 159 425 - -
Phco1g00723 490 CDD TM_EGFR-like 27 57 - -
Phco1g00723 490 MobiDBLite consensus disorder prediction 461 484 - -
Phco1g00723 490 ProSiteProfiles Protein kinase domain profile. 153 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00723 490 Gene3D Transferase(Phosphotransferase) domain 1 229 438 - -
Phco1g00723 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Phco1g00723 490 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Phco1g00723 490 MobiDBLite consensus disorder prediction 440 490 - -
Phco1g00723 490 FunFam Putative receptor-like serine/threonine-protein kinase 229 439 - -
Phco1g00723 490 Gene3D Phosphorylase Kinase; domain 1 135 228 - -
Phco1g00723 490 SMART serkin_6 153 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00723 490 Pfam Protein kinase domain 156 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00723 490 FunFam Probable serine/threonine-protein kinase At1g01540 133 228 - -
Phco1g00723 490 SUPERFAMILY Protein kinase-like (PK-like) 131 425 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00723 Phco-Chr1 6654988 6658093 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco1g00723 Pkinase 2.2e-47 CL0016