Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00714 ATGCCAACCCTTCTCTCTGTAACTGCAACTCCAACTCCCACTTTCACACTCACTCTCAACAAAACCCTAATTTCTCTTCCCAATCCCTACTCACTCTCCTATAAATTCAACTCCCTCATCTCCCACTGCTCCCTCTCCCACCGCGAGGAAGACCGCTGGCTCCGAGAAGAGCAGCGCTGGCTCCGCGACGAACAGCGCTGGCTCCGCGAGGAGCAGCGCTGGGCTCGCGAACGTGATCAACTCCTCCGCGAGATCTCCGACCTCAATCTCCAAATCCAGGCGATGGAGCGTCGCCTCTCCACGCGCGAATTGTCCACTCCGGCCTACGTCTCCGACGCCATCGCGAATGTGGCGTTGCTCTTGCAGGTGCTGAAGGACAAGAATATGGTTCTCGAGAGCGGTTCGAGTGTTCGGGAGATGGAGGATGTTATAACACACACTGAACACACTCTCAAGAACAGAGAAGAAAAGGGAACAAGTGATCTGGAGGAGAAGCAATTTGAAGAGGAGGAGAAACGATTTGAAGAGGTCATGGAAAGGAAGAATGAGGTTGTGGTGGTTGAGGAGTCTGTAAGGGTTGAAATGATGAGCATTTTGAGGAAAGGTTCTGAAGGAGAAGAGGTTCGACAGATGCAGGAAGCGTTGCTGAACTTGGGGTTTTACTCCGGAGAGGAAGACATGGAATACTCAAGCTTCTCAAGTGGAACAGAGCGTGCTGTGAAGACTTGGCAAGCTGCATTAGGTGTCCCTGATGATGGTATTATGACTTCTGAACTTCTTGGAAGGCTCTATTTGGAGATAAGGAAAAAGGACGCTGGCAGCACGACTCAAGATAAACAATCTACTACTGTTTTACCAAAGGAAGGTGAAAATGGAGCTGCAGTTCCTTCAGTGACAGATATTTCAGAGGTTCAGCAAAATGTTGCGAAAAGTGACAAGGGAACAGAAGTCTCCGATCGAAGAGTTTTTCTCATTGGGGAGAATCGATGGGAAGAGCCATCAAGACTTGTCGCAAGTGATGGAGTTGATAGGGGCAAAAACAAGAATGCAACGACAAAATGCCTTCAATGTCGTGGGGAAGGCCGCTTGATGTGTACAGAGTGTGATGGATCTGGCGAACCAAATATTGAACCTCAATTTTTGGAATGGGTGGAGGAGGGCACAAAATGCCCATACTGTGACGGTCTAGGGTATACTGTATGTGATTTATGTGGAGGGAAAACTATGGTTTAG 1233 0.4891 MPTLLSVTATPTPTFTLTLNKTLISLPNPYSLSYKFNSLISHCSLSHREEDRWLREEQRWLRDEQRWLREEQRWARERDQLLREISDLNLQIQAMERRLSTRELSTPAYVSDAIANVALLLQVLKDKNMVLESGSSVREMEDVITHTEHTLKNREEKGTSDLEEKQFEEEEKRFEEVMERKNEVVVVEESVRVEMMSILRKGSEGEEVRQMQEALLNLGFYSGEEDMEYSSFSSGTERAVKTWQAALGVPDDGIMTSELLGRLYLEIRKKDAGSTTQDKQSTTVLPKEGENGAAVPSVTDISEVQQNVAKSDKGTEVSDRRVFLIGENRWEEPSRLVASDGVDRGKNKNATTKCLQCRGEGRLMCTECDGSGEPNIEPQFLEWVEEGTKCPYCDGLGYTVCDLCGGKTMV 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00714 410 Gene3D - 192 264 IPR036366 -
Phco1g00714 410 SUPERFAMILY PGBD-like 196 264 IPR036365 -
Phco1g00714 410 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 225 410 - -
Phco1g00714 410 Coils Coil 160 180 - -
Phco1g00714 410 MobiDBLite consensus disorder prediction 271 293 - -
Phco1g00714 410 Pfam Putative peptidoglycan binding domain 205 262 IPR002477 -
Phco1g00714 410 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 343 409 IPR036410 -
Phco1g00714 410 Coils Coil 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00714 Phco-Chr1 6542691 6548358 Dispersed