Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00702 ATGGAGGTTTCCAAAATATTTGAGCCAGTAATTGATCTTTTCTGGGATCGGGCTATTAAGCAGGTGACTTACATTTTCTGTTATGAGAAAAATGTTGATGGACTAAACAAGAGAGTTAAGCGTCTTGGAGACGTAAAAGCGAGGTTAGATCGTGAACGTGATCTAGCTAAAAGAAAGGGTGATATTGTTGAACCTAGCGTCGAAAAATGGTTTGAGGAAGTGGGTGAATTTGAGACTAAAGTCGACAAGTACCAGAAAAATGCAGGTCACAAGAAGACACGGGGTTTCTATTATTTATTTCCTTACTATAGGCACAAACTGGGTAGACAAGCAAATAAGATGGAACAGGAGGCTTTACAACTAGGAGAAGAATGCCCCAAGTCAGATGAAGTTTTTCATGCAGAGAAAGTAACATGTTTTGGCCTCACTTCGTCTAATCCTGTCTACATCGAATTTGATAGTAGAAAATCCATTATGAAAGACATAATGACAAAACTTGAAGATCCCACTGTGAAAATTATTGGACTCCATGGATCACAAGGGATGGGTAAGAGCACATTAATAAAAGAAATTGTTAACAAAGCTCGACATGAGAAGTTGTTTGATAAGGTGGCTCAAATAGATGTAACAATCAATCCCAATCCACTCAAAATTCAGGAAGACATTGCTTATGTGTTAGGATTGAAATTGGAAGGGGAAAGTGAAAATGTAAGGGCTGATTATCTACGGAGGTGGTTAAAGATAGAAAATGTGAACATCCTTATAATCTTGGATAATCTTTACGAAAGATTAGACTTGGATACGTTAGGTATTCCAGTTGATGATGATTATAATTTAAGAAAGAAGATTGAGTTAAACATAAGGCCAAACAAACAGGACAAACAGGACAAACAGGACAAACAGGATAATGTCTCAAATTCTAACAAGAAAACTGCTTCTCCCGACTGTACACAGGGTAATGACAACAAAATGCTAAAAAAAGAAAATTTTCTTGGTGATTACAAGGGATGCAAAATTTTGCTTTCTTCACGTGATAAGAAAGTATTTTTTGATGATGTTGAGTCAAATTTCAATTTAAAGGAATTGGATGACAATGAATCCTTGTTGTTGTTTGAGAAGGTGGTCGGAGGAGGTAATCAAATGCCTATAGAAGAAATTAAGAACTACTGTGCAGGGTCACCCATGAGAATAGTTTCATTTGCAACGAAATTCAAAAAATGGAGTGAGTCAGTAAACAAACCTACACTAGACAAATTTAAAAAACAAGGTCTAGAGGAATGGCAAAAGTCTGTGGATAGTGCTGAAAAGATAAAATATGACCTTCCAAAAAATGAGGAGCTCAGATACTTGCACTTGCTTTGTGCTCAAATGGGCCATCCACCTCTTGTTATGGACTTGGTGAAATATTGCTTTGGATTGGGTATACTTGAAGGGGTATCCTCGCTTAGTGCAGCTCGACACAAAATAAATAAATGGATTGACGACCTAAAAGAGTTGAACTTGGTGTCGTACGAAAGTCCTAATATTCATTTCTATGTGCCTCATATGGTTCGAGAATGTGCTTTAAGTAATGCACACAAGGATCACAATGTTTTTGCTCTCAAAGATGGCAAACTAGACGATTGGCCCGATCTCAAAAAATGTACTTCTATTTCTATATGCAACAGTGATATTATTGATGAGCTTCCCCAAGTCATAAATTGTCCTCAACTTAAATTTTTGCAAATAGAAACTAATGATCCATCTTTGAAAATACCTGGGAGCTTTTTTGAAAAAATGGAAAGTTTGAGAGTTTTAATATTGATTGGTTTTCGTCTATCAAGCTTACCATGTTCGATTAAATGCCTATTGAATCTTAGAATGCTTTGTTTGGAGCGATGCACTTTAGATTGCAATTTATCTATAGTGGGAAAGTTGAAAAAATTAAGAATTCTCAGTTTCTCTGGATCTCAACTTAAAAATTTGCCAGATGAATTACGAAACTTGGATAAGTTACAACTGCTAGACATCAGTGATTGTTTCGAATTGAGGATTATTCCACCTAATCTTATATCAAGTTTAACATGTTTGGAAGAGCTTTATATAAGAAGAAGCTTGATGAAAAGGTTGGTGGAAAGAGAGACAAACAAAGGTCAAAATTCATTTATGTTTGAGCTAAAGAATTTGCATCAATTGAAAGTGGTTGACTTTAGCATCCCGTGTGTATCAATGTTTCCCAATAACTTGTTCATTGACAAGTTAAAAAATTACAAGATTGAGATTGGAGACTTTGAAGTGTTCCCTCTTGGGAAATTTAGGATGCCTAATAAATATGAAGAACTCAAAGTTTTGGCATTGCAACTAGAGGATGGCATAGATGTTCACTCTCATAAAGGCATAAAATTGTTGTTTAAAACAGTACAATGTTTGTTGTTGGGAAAGGTAGGTGTTCAAAATGTTGTTAACGAGTTGAACGTAGATGGATTTTCGAATCTGAAACAGTTATCCATCATAGATAACAATGACGTCAAATATGTCAATTCAACAGAATCGCCTAATTGTGTGAATCTTTTTCCCAATTTGGAATCTCTATGCCTCTACAATCTGATGAACTTAAAGATGATATGTTACGGCCGAGTTACGGTTACATCATTTGCCAAATTAAAAACCATCAAGGTTGGGATGTGTTACCAATTGGAGAAACTCTTCTCCTTTGACATCATTGAAATTTCTACTAGTGCAGAAATACATAAGATTTCTGAATGGAACTCTTACATGAATAAATTTCTTGCTAGTCTAGAAATGATTGAGGTTTGTGAATGTGTATCTTTAAAGGAGATCCTTCAAATACAAGTGGATTATGATAAGGTTGAATTTCTTAAGTTGCACACTTTGACACTCCAATCATTACCATCATTTACATGTTTTAATACCAAAGTGGAGAGGTCTTCCAGGCCACATCTGACAGAAGATCAAACTGCAAATGGGAGTCACACTGAAATTTCTACTGAAGAAGATGATCATAGTGACAAGGCACCTCCTCTTTTTGATAAACTAGTATGA 3042 0.3554 MEVSKIFEPVIDLFWDRAIKQVTYIFCYEKNVDGLNKRVKRLGDVKARLDRERDLAKRKGDIVEPSVEKWFEEVGEFETKVDKYQKNAGHKKTRGFYYLFPYYRHKLGRQANKMEQEALQLGEECPKSDEVFHAEKVTCFGLTSSNPVYIEFDSRKSIMKDIMTKLEDPTVKIIGLHGSQGMGKSTLIKEIVNKARHEKLFDKVAQIDVTINPNPLKIQEDIAYVLGLKLEGESENVRADYLRRWLKIENVNILIILDNLYERLDLDTLGIPVDDDYNLRKKIELNIRPNKQDKQDKQDKQDNVSNSNKKTASPDCTQGNDNKMLKKENFLGDYKGCKILLSSRDKKVFFDDVESNFNLKELDDNESLLLFEKVVGGGNQMPIEEIKNYCAGSPMRIVSFATKFKKWSESVNKPTLDKFKKQGLEEWQKSVDSAEKIKYDLPKNEELRYLHLLCAQMGHPPLVMDLVKYCFGLGILEGVSSLSAARHKINKWIDDLKELNLVSYESPNIHFYVPHMVRECALSNAHKDHNVFALKDGKLDDWPDLKKCTSISICNSDIIDELPQVINCPQLKFLQIETNDPSLKIPGSFFEKMESLRVLILIGFRLSSLPCSIKCLLNLRMLCLERCTLDCNLSIVGKLKKLRILSFSGSQLKNLPDELRNLDKLQLLDISDCFELRIIPPNLISSLTCLEELYIRRSLMKRLVERETNKGQNSFMFELKNLHQLKVVDFSIPCVSMFPNNLFIDKLKNYKIEIGDFEVFPLGKFRMPNKYEELKVLALQLEDGIDVHSHKGIKLLFKTVQCLLLGKVGVQNVVNELNVDGFSNLKQLSIIDNNDVKYVNSTESPNCVNLFPNLESLCLYNLMNLKMICYGRVTVTSFAKLKTIKVGMCYQLEKLFSFDIIEISTSAEIHKISEWNSYMNKFLASLEMIEVCECVSLKEILQIQVDYDKVEFLKLHTLTLQSLPSFTCFNTKVERSSRPHLTEDQTANGSHTEISTEEDDHSDKAPPLFDKLV 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00702 1013 MobiDBLite consensus disorder prediction 288 320 - -
Phco1g00702 1013 Gene3D Ribonuclease Inhibitor 513 969 IPR032675 -
Phco1g00702 1013 MobiDBLite consensus disorder prediction 305 320 - -
Phco1g00702 1013 SUPERFAMILY L domain-like 542 908 - -
Phco1g00702 1013 Coils Coil 104 124 - -
Phco1g00702 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 427 IPR027417 -
Phco1g00702 1013 Gene3D - 141 358 IPR027417 -
Phco1g00702 1013 Coils Coil 32 52 - -
Phco1g00702 1013 MobiDBLite consensus disorder prediction 977 1013 - -
Phco1g00702 1013 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 34 972 - -
Phco1g00702 1013 Coils Coil 67 87 - -
Phco1g00702 1013 MobiDBLite consensus disorder prediction 288 304 - -
Phco1g00702 1013 PRINTS Disease resistance protein signature 247 261 - -
Phco1g00702 1013 PRINTS Disease resistance protein signature 660 676 - -
Phco1g00702 1013 PRINTS Disease resistance protein signature 173 188 - -
Phco1g00702 1013 Pfam NB-ARC domain 159 277 IPR002182 GO:0043531
Phco1g00702 1013 MobiDBLite consensus disorder prediction 993 1013 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00702 Phco-Chr1 6349222 6352263 Proximal