Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00693 ATGGCAAAGCACGAGGAGCTTCCCATCCCGATTTACAATAACCTAGAGTTTGTTTATGGCGGCGGTTCAGCGCTCGAAGAAGCTCAGCTTCGTTTCGATCATTTGAAGTCCAAATTCTTCGAAGTCTTCAGTCATCATCCTCAAGTCTTCGCTCGTTCACCTTGTTATTCGGTGTTGCCTATGGCTATTCGGCAAGATACGATCGTGGCGATTCAGAAAAACGAGGCGGAAAAGGTTCTTAGGATTGCTAACGTGAACGGTGACAAATATTCTATTTGTACTTATCCTGCTGATCCTCTCCAGGAAATCGACTTGAAGAATCACAAATGGGGCCATTATTTTATTTGTGGAAAGAGTGTAACACTGTTGTTTAATTCAGTATTAATTGATATTGCAATTTCTGTAGGTACAAAGGCAATCTCTGTAATGGCCAAGACTGGGTTTGCAGAGCTTATTGATTTCAACCCAATTCGTGCAACAGATGTGCAACTTCCTACTGGTGGGAGTTTTGTGATAGCTCATTCTCTGGCAGAGTCTCAGAAGGCTGTTACTGCTGCGACAAATTATAACAATAGGGTTCTTGAATGCCGTTTGGCTTCTATTGTCCTAGCTATAAAGCTAGGAATGGATCCAAAAGAGGCAATATCAAAAGTGAGCACATTGTCTGATGTTGAAGGTTTATGTGTATCATTTGCTGGTATTCATAACTCATCTGATCCTGTATATGCTGTAAAGGAATATTTGAAAGAAGAACCATATACCGCTGAAGAAATTGAAGAAGTTACTGGGGAAAAGCTGACCTCATTTTTGAGCAACAATGCAGCTTATTTAGAAGTCTTAAAAGTTGCAAAGCAATACAAGTTACATCAGAGAGCTGCTCATGTGTATTCAGAAGCCAAGAGGGTACATGCTTTTACGGATGTCGTATCCTCAAATCTAAGCGACGAGGACAAGCTGAAGAGGCTTGGTGACCTTATGAACGAGAGTCATCATAGCTGCAGCGTTTTATATGAGTGCAGCTGTCCAGAGTTGGAAGAACTTGTAAATATTTGCCGTAACAATGGTGCTCTTGGGGCTATGCTTACTGGAGCTGGATGGGGTGGTTGTGCAGTTGCTTTGGTGAAGGAGAACATAGTTCCACAATTTATCCTTAATTTTCAGTATTCTGTTTCAGTGTTGCGATTTGGAACAGAGGCAAGTAAGCGCAAATCAGAACTTAAGCACCAACTTCTAAATGAGGAAAGAGAAGCGTTTAAAGGAGAAAAGAAATGGAAAAAGGAGTGGTTGATGGTGATGATTCACAGGTCAAAAGCAAGGATTGAGAGAAACCTTTTAGACAAGTTGAAAGCTCTTACTCTGTTATTTCCTATTGAGTGTGATGAATTTCCGAACTACGGATTTCTACAACAGTTGCCAAATGTAAATAAGCTTGTGGTGTGTAGCAGTTCCTTCGAGTTCATTTTCTGCCTTCAAAGGCCAGATAATAGTGAACATTTATTACAGTTGAAAGAATTACGATTGGAGTCCCTTGGAGAGCTGGTTTCCATTGGATTACAGAATTCATGGACTGAGCCCTTTGTCAAAAATCTAGAAACCTTTGAAGTCATTAGTTGTTCCAGAGTGGAAAACTTGGTATCATGCAGAGTGTCTTTCTCAAATCTGATATGTTTAAAAGTAGAAAGTTGTAAAAGGTTGTCGTATTTGTTCACATCCTCAACAGCACAAAGTTTGGCTCAACTCAAAAGAATGGAGATAAGAGAGTGTGAATCAATTGAAGAGATAGTGTCTAAGGAGAAGGGAGAGGAATCAGACGAGGATGAGATAATGTTTCCGCAACTCAATTGTTTGAATCTTGATAGCTTATCTAAGTTCAGAAGGTTCTACAAAGGGAATTTAAGTTTCCCATTATTGGAGGAATTATCAGTAAGAGATTGCCACGAGATGGAAACTTTATGTGAAGGTACTGTAAAGACAGACAAGTTGTCTCAAGTAACAATTGATGGAGAGGATATTCCATTGAAAAGTGATCTCAACTTTACTATGAGGAAGGAATTTATAAAAAAGATTTCAGAGCTTAAACAAATTGATCTCAAAAGTAGACCAGGGCTACAAGAGATATGGTATGACTCATTGCATATTCCCGACTTCTGTTTCAGTAACTTGGCCATATTGACTGTGGATGAATGCCAGTTTTTATCAGATGCAGTGCTACCCTTCCATTTACTTCCTCTATTACCCAAATTAGAAATATTGAAAGTTCAAAACTGTGATTTTGTGAAAACCATCTTTGATGTCAAATGTACAAAAGACACATTAGTTCCTCTAAAGAAACTGGTTTTATCAAAGCTTCCAAATCTTGAGAATGTTTGGAATGGAGATCCTCATGGAATTTTACGCATGCAACATCTAAAAGAAGTACATGTTAAGGAATGTAAAGGCCTTTCAAGCGTGTTTCCAGCATCTGTAGCAAAATATCTTATGAAACTTGAAGATCTAGTAGTGAAAGACTGTGAGGGATTGATGACAATTGTTGCAGAGGAATGTGTTGAGGATGAAGAAATAATATTTGAGCGACTACAGGTTTTGCATCTTAAAAGATTAAAAGAGCTGAGGTGCTTTTACGCTGGCAATTTTACTTTGACTTTTTCATCCTTGAAAGAAGTCCACGTCATCAAGTGCAGCTCAATGAAAACTTTTAGTGCAGTCAACAAAATAAATCATTTGACAAAGTGGTACTCTGCAGAATATTTGAAACCCCGATTGGAAAGTGATCTTAATTTTGCTGTGCGCAGAATTTCTGAAGAAGAGATGTGCTTATATGGCTTCACACTCTCCTCGATCGAACCCACCACATCAATCTTCGTCATCCCTACCGTCCTCACTCCCTGCCTCGCCTTTAGTCGCGCCCGCTCCACTGCCGACAGCGGGTTCCACTTCTCCTTCCACGTGCACGACACCTTTATACAATGTCCATCAACTATTCCCCGCCCTAGCCGCCCTCCCTCCAGTCCATCTGCCACTCCCTCTCCAATATCTCCTCCCCGTCGCCCGACCACTACCACTTCGATACCCCCATCGCTTCGCTGCCTTCGCCCATCGCCTCTCCCACTTTCTCAATCTACCCTCGTCCACACTGCTCTCAAGGGACTCGTCGCCGAGTTCTCAAAGGCCGTCGAGACCCTTTCAGTCTACAACAATGGCAGCAAAGTTCTCATCCACGTCAATTGCAAATCCCTCTACTCCTCCCAAAAAAACGAGCCATAG 3264 0.4108 MAKHEELPIPIYNNLEFVYGGGSALEEAQLRFDHLKSKFFEVFSHHPQVFARSPCYSVLPMAIRQDTIVAIQKNEAEKVLRIANVNGDKYSICTYPADPLQEIDLKNHKWGHYFICGKSVTLLFNSVLIDIAISVGTKAISVMAKTGFAELIDFNPIRATDVQLPTGGSFVIAHSLAESQKAVTAATNYNNRVLECRLASIVLAIKLGMDPKEAISKVSTLSDVEGLCVSFAGIHNSSDPVYAVKEYLKEEPYTAEEIEEVTGEKLTSFLSNNAAYLEVLKVAKQYKLHQRAAHVYSEAKRVHAFTDVVSSNLSDEDKLKRLGDLMNESHHSCSVLYECSCPELEELVNICRNNGALGAMLTGAGWGGCAVALVKENIVPQFILNFQYSVSVLRFGTEASKRKSELKHQLLNEEREAFKGEKKWKKEWLMVMIHRSKARIERNLLDKLKALTLLFPIECDEFPNYGFLQQLPNVNKLVVCSSSFEFIFCLQRPDNSEHLLQLKELRLESLGELVSIGLQNSWTEPFVKNLETFEVISCSRVENLVSCRVSFSNLICLKVESCKRLSYLFTSSTAQSLAQLKRMEIRECESIEEIVSKEKGEESDEDEIMFPQLNCLNLDSLSKFRRFYKGNLSFPLLEELSVRDCHEMETLCEGTVKTDKLSQVTIDGEDIPLKSDLNFTMRKEFIKKISELKQIDLKSRPGLQEIWYDSLHIPDFCFSNLAILTVDECQFLSDAVLPFHLLPLLPKLEILKVQNCDFVKTIFDVKCTKDTLVPLKKLVLSKLPNLENVWNGDPHGILRMQHLKEVHVKECKGLSSVFPASVAKYLMKLEDLVVKDCEGLMTIVAEECVEDEEIIFERLQVLHLKRLKELRCFYAGNFTLTFSSLKEVHVIKCSSMKTFSAVNKINHLTKWYSAEYLKPRLESDLNFAVRRISEEEMCLYGFTLSSIEPTTSIFVIPTVLTPCLAFSRARSTADSGFHFSFHVHDTFIQCPSTIPRPSRPPSSPSATPSPISPPRRPTTTTSIPPSLRCLRPSPLPLSQSTLVHTALKGLVAEFSKAVETLSVYNNGSKVLIHVNCKSLYSSQKNEP 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00693 1087 Gene3D - 188 338 - -
Phco1g00693 1087 Pfam GHMP kinases C terminal 319 376 IPR013750 -
Phco1g00693 1087 SUPERFAMILY GHMP Kinase, C-terminal domain 169 385 IPR036554 -
Phco1g00693 1087 MobiDBLite consensus disorder prediction 994 1020 - -
Phco1g00693 1087 Gene3D Ribonuclease Inhibitor 396 663 IPR032675 -
Phco1g00693 1087 Gene3D Ribonuclease Inhibitor 664 825 IPR032675 -
Phco1g00693 1087 SUPERFAMILY RNI-like 685 906 - -
Phco1g00693 1087 Gene3D - 23 132 IPR014721 -
Phco1g00693 1087 Gene3D - 138 162 IPR014721 -
Phco1g00693 1087 FunFam Galactokinase 188 338 - -
Phco1g00693 1087 MobiDBLite consensus disorder prediction 993 1025 - -
Phco1g00693 1087 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 165 IPR020568 -
Phco1g00693 1087 PANTHER MEVALONATE KINASE/GALACTOKINASE 6 120 - -
Phco1g00693 1087 Gene3D - 163 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00693 Phco-Chr1 6228814 6257033 Proximal