Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00684 ATGGCGTCTTTGTTGCGAGTGAGAAACGCTTCTCGTGGCTCTATGGCGAGTCTTCTCCGTTGCTTCAGCAACGTTCCCGAGAACACCGTCTATTCGGGTCCCACGGCGCAGAACTCGAACAAGCGAGTCACGCTCAGGCACTTGAGCGAGAAGCACCGATCGTCCCAGCCCATCACCATGGTCACCGCTTACGATTACCCCGCCGCCGTTCACCTCGACACCGCCGCCGTCGACATCTGTCTCGTAGGCGACTCCGCCGCCATGGTGGTCCACGGCCACGACACCACGCTCCCCATCACGCTCGACGAGATGCTTGTCCACTGCCGCGCCGTGGCCCGCGGGGCCAAGACGCCGCTCCTCGTCGGGGACTTGCCTTTCGGGACCTACGAGTCCAATCCCAATCAGGCGGTGGATACAGCGGTTCGGATTTTGAAGGAAGGTGGAATGGATGCCATAAAACTTGAAGGAGGGTCTCCTTCCAGAATTGTTGCAGCGAAGGCTATTGTTGAGGCTGGAATTGCTGTCATGGGCCATGTGGGTCTTACTCCTCAGGCCATTAGTGTTTTAGGAGGGTTTAGACCTCAAGGAAGAAATGTTGCCAGTGCCGTTAAGGTTGTAGAGACTGCATTGGCTTTGCAAGAGGCAGGGTGTTTTTCTGTTGTTCTGGAATGTGTGCCTCCGCCCGTTGCCGCCGCAACAACGGCAGCCCTTCAAATTCCCACAATTGGAATTGGTGCTGGACCCTTTTGCAGTGGACAGGTGCTGGTTTACCATGATCTGCTTGGTATGCTACAACACCCCCACCATGCAAAGGTTACTCCAAAATTCTGTAAGCAGTATGCACGTGTAGGAGACGTCATCAATAAAGCCTTACTGGAGTATAAGGAAGATGTTACAAATGGTTCGTTTCCTGATGCTCACCATAGCCCGTACAAAATAAGCAAGACAGATGCAGATGTTTTTTCAAATGAGTTGCAGAGGTTAGGTTTGGAAAAGGCAGCATCTGCAGCATCTGAAGCAGTTCAGAAGATGGATACGGCTTAA 1044 0.5326 MASLLRVRNASRGSMASLLRCFSNVPENTVYSGPTAQNSNKRVTLRHLSEKHRSSQPITMVTAYDYPAAVHLDTAAVDICLVGDSAAMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYESNPNQAVDTAVRILKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFSVVLECVPPPVAAATTAALQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVTNGSFPDAHHSPYKISKTDADVFSNELQRLGLEKAASAASEAVQKMDTA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00684 347 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 34 326 IPR003700 GO:0003864|GO:0015940
Phco1g00684 347 NCBIfam 3-methyl-2-oxobutanoate hydroxymethyltransferase 42 309 IPR003700 GO:0003864|GO:0015940
Phco1g00684 347 CDD KPHMT-like 45 304 IPR003700 GO:0003864|GO:0015940
Phco1g00684 347 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 42 308 IPR015813 GO:0003824
Phco1g00684 347 Gene3D - 40 322 IPR040442 -
Phco1g00684 347 FunFam 3-methyl-2-oxobutanoate hydroxymethyltransferase 40 315 - -
Phco1g00684 347 Coils Coil 330 347 - -
Phco1g00684 347 Pfam Ketopantoate hydroxymethyltransferase 42 305 IPR003700 GO:0003864|GO:0015940
Phco1g00684 347 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 43 310 IPR003700 GO:0003864|GO:0015940
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00684 Phco-Chr1 6197843 6200634 Dispersed