Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00660 ATGCTCTTTTTGAGTGTGGTTGCGGTGTTATCTGTTAGTGTACTTAAATATTACATTGGACGATTCTTGCTTTACTTGGCTGTCTGCTATCAGCTCCTTTTGGTTGTTACTAACGTTGTATTTGGATTTGTTAGCAATTTAGCTGAGTTCTTTCGAAAACCTTTACTTTCAACTTTGGATTGGACTATAATATATCATCACCTCCCCTATCTGGAAAGGTTCATCGGCTTTAAGATGGAGCTCACTATTACGCAGCCTGATGATTGGCATCTTCACCTTCGTGATGGTTCTCTTCTTGAAGCTGTCCTCCCTCACAGTGCTAAGCATTTTGGAAGGGCTATCGTGATGCCAAATTTGAAACCACCTGTCACTACCACATCTGCTGCTGTCACTTATCGAGAGTCCATTTTGAAAGCAATACCTATGGATAGCAACTTCACTCCTCTCATGACACTTTACCTCACAGACTTAACTACACCTGACGAGATTAAACATGCAAAAAAGAGTGGAGTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCTACTACGAATTCCCAAGATGGTGTTACAGATCTTTTTGGAAATTGTTTTTCTGTTCTCAAGGAAATGGCTGAGCAAAATTTACCATTATTGGTTCACGGAGAGGTTACAAATTCAAAAGTAGATATTTTTGACCGAGAAAAGGTCTTTATTGAAACAATTTTGGAGCCTTTAGTTCAAAGGCTTCCACAACTGAAGGTTGTGATGGAGCATATTACTACTGCAGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGGTTACGTAGCTGCAACTGTTACACCACAACATCTTCTTCTTAATCGAAATGCTTTGTTCCAAGGTGGCTTACAGCCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCATAGACAGGCTATTGTTTCAGCTGTTACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCACCACATGATAGGCGTAAAAAGGAATGTTCATGTGGATGTGCTGGGATATACAACTCCCCAGTTGCTCTATCACTATATGCCAAGGTTTTTGAAGAGGCTGGTGCACTTGATAAGCTGGAGGCTTTTACAAGCTTTAATGGACCTGACTTCTATGGCCTCCCTAGAAATAAGTCAAAGATTAAACTGAGGAAAGCTCCTTGGAAAGTACCTTATTATTTGTCATTTCCATTTGGAGACATTGTTCCCATGTTTGCTGGTGAAACCCTTCAATGGGAGGCATTGCCTTGTTCACTTACATAG 1284 0.4034 MLFLSVVAVLSVSVLKYYIGRFLLYLAVCYQLLLVVTNVVFGFVSNLAEFFRKPLLSTLDWTIIYHHLPYLERFIGFKMELTITQPDDWHLHLRDGSLLEAVLPHSAKHFGRAIVMPNLKPPVTTTSAAVTYRESILKAIPMDSNFTPLMTLYLTDLTTPDEIKHAKKSGVVYGVKLYPAGATTNSQDGVTDLFGNCFSVLKEMAEQNLPLLVHGEVTNSKVDIFDREKVFIETILEPLVQRLPQLKVVMEHITTADAVKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHDRRKKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKSKIKLRKAPWKVPYYLSFPFGDIVPMFAGETLQWEALPCSLT 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00660 427 CDD DHOase 81 419 IPR004721 GO:0004151|GO:0019856
Phco1g00660 427 PANTHER DIHYDROOROTASE 78 420 IPR004721 GO:0004151|GO:0019856
Phco1g00660 427 NCBIfam dihydroorotase, homodimeric type 80 420 IPR004721 GO:0004151|GO:0019856
Phco1g00660 427 ProSitePatterns Dihydroorotase signature 1. 88 96 IPR002195 GO:0016812
Phco1g00660 427 FunFam Dihydroorotase 78 422 - -
Phco1g00660 427 Pfam Amidohydrolase family 88 399 IPR006680 GO:0016787
Phco1g00660 427 Gene3D - 79 421 - -
Phco1g00660 427 Hamap Dihydroorotase [pyrC]. 79 422 IPR004721 GO:0004151|GO:0019856
Phco1g00660 427 ProSitePatterns Dihydroorotase signature 2. 324 335 IPR002195 GO:0016812
Phco1g00660 427 SUPERFAMILY Metallo-dependent hydrolases 80 420 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00660 Phco-Chr1 6047305 6051713 Dispersed