Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00646 ATGAACAGCGACTGCGGGAGAAGCCGCCGTAAAGGTTGCCGGTGGGAAGAATCACGTTTAGGTTTGCTTTGGCGCAGTGTTTATGCAAAACAGGGGCATAGTGAAGTGACATTTGTTGGATATAAACGAGAAATATGTATAATTTGGAACGATTCTCAGAAAGGGCAGCAAGAAGCTAAAACCCTAAACCCCCAAATTGACTCAGGTCCTCACTCTTCGTCTTCAATGGCAACATGTTTTCTGAAAACCACACCCAACTTGTTCCACAAACACCAAAATTATCTCGCATTCTCCGCCAATAGCACAAGTACAAGAACCAGTGTCCCCGTTTCGCAGAAGAGGAGATCGCGTTCGTTCCCTGTAGTGTCAATGTCAGCCACGCCCGTTCAAACTTCTCTCGTAAAGTCTGCACCTTCGTCCCAAAACACGGGTATTCCAATAATGGTTAATGCGTGTACTGGAAAAATGGGAAAGGCCGTGATTAATGCTGCGGAAGCTGCTGGGCTGCTTGTTGTTCCTGTGTCATTTGGCTGTGAAGAGGAGTCTGGAAAGACTTTTGAGATAGGTGGAAAGGATTTTCTTGTGCATGGTCCTTCTGACAGGGAGAGTGTTCTTTCATCTGCCCTTGAAAAATATCCAAATTTGATTGTTGTGGACTACACAGTACCAAATGCGGTTAATGGCAATGCTGAGCTATACTGTAAGGTTGGGGTGCCCTTCGTGATGGGAACCACTGGTGGAGATAGGGACTTGTTGCATAAGACTGTTGAAGACTCAAAGAATTATGCTGTGATATCCCCGCAAATGGGAAAGCAGGTTGTTGCTTTTCTTGCAGCTATGGAAATTATGGCAGAGCAATTTCCTGGAGCTTTCTCGGGGTATTCGTTACAGGTGCTGGAGTCCCATCAAGCAAGCAAAGTTGATGCATCTGGAACTGCGAAGGCTGTAATTTCTTGCTTCAATAAACTGGGGGTGTCTTTTGATATGGATCAGATAAAATTGATCAGGGATCGCAAGCAACAACTTGAAATGGTTGGAGTCCCAGAGGAGCATTTGTCTGGTCATGCATTTCATATGTATCATTTGACATCACCGGATGACACGGTTTCTTTTGAATTTCAACATAATGTTTGTGGTAGATCAATATATGCAGAAGGCACTGTTGATGCTGTATTGTTTCTTGCTAAGAAGATCGAAGCAAAGGATGAAAAGAGATTGTATAATATGATTGATGTTTTGGGAGAGGGCAATGTGCGATAA 1260 0.4397 MNSDCGRSRRKGCRWEESRLGLLWRSVYAKQGHSEVTFVGYKREICIIWNDSQKGQQEAKTLNPQIDSGPHSSSSMATCFLKTTPNLFHKHQNYLAFSANSTSTRTSVPVSQKRRSRSFPVVSMSATPVQTSLVKSAPSSQNTGIPIMVNACTGKMGKAVINAAEAAGLLVVPVSFGCEEESGKTFEIGGKDFLVHGPSDRESVLSSALEKYPNLIVVDYTVPNAVNGNAELYCKVGVPFVMGTTGGDRDLLHKTVEDSKNYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQASKVDASGTAKAVISCFNKLGVSFDMDQIKLIRDRKQQLEMVGVPEEHLSGHAFHMYHLTSPDDTVSFEFQHNVCGRSIYAEGTVDAVLFLAKKIEAKDEKRLYNMIDVLGEGNVR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00646 419 Pfam Dihydrodipicolinate reductase, C-terminus 273 413 IPR022663 GO:0008839|GO:0009089
Phco1g00646 419 Gene3D - 147 413 - -
Phco1g00646 419 Pfam Dihydrodipicolinate reductase, N-terminus 145 268 IPR000846 GO:0008839|GO:0009089
Phco1g00646 419 FunFam 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 271 378 - -
Phco1g00646 419 NCBIfam dihydrodipicolinate reductase 145 419 IPR011859 GO:0008839|GO:0009089|GO:0070402
Phco1g00646 419 PANTHER DIHYDRODIPICOLINATE REDUCTASE 107 417 IPR023940 GO:0008839|GO:0009089
Phco1g00646 419 FunFam 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 145 301 - -
Phco1g00646 419 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 144 414 IPR036291 -
Phco1g00646 419 Gene3D Dihydrodipicolinate Reductase; domain 2 271 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00646 Phco-Chr1 5867703 5872781 Dispersed