Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00639 ATGGAGGTTGGATTCTTAGGTTTGGGGATAATGGGCAAGGCTATGGCAACCAACCTGCTACGCCATGGCTTCAAAGTCACTGTTTGGAACAGAACCCTCTCCAAGTGTGAAGAACTTGTGCAATATGGTGCTTCAGTTGGAGAAACGCCAGCAACTGTTGTCAAGAAATGCAAGTACACAATTGCAATGTTATCTGATCCTTCAGCTGCTTTATCGATTGTGTTTGATAAAGATGGTGTTCTTGATCATATTAATGGAAAAGGTTACATTGACATGTCAACAGTTGATGCTGATACATCCTCCAAGATATCTGAGGCAATCAAAGCTAAAGGTGGTTACTTCCTTGAAGCTCCTGTTTCGGGTAGCAAGAAGCCTGCAGAAGATGGTCAACTAGTTATACTTGCTGCTGGGGACAAGGCATTGTATGATGAAGCACTTCCAGCATTTGACATACTGGGGAAGAAGTCTTTCTTTTTGGGTGAGGTTGGAAATGGTGCAAAAATGAAACTTGTTGTTAACATGATAATGGGCAGTATGATGAATGCTTTCTCTGAGGGACTCACACTAGCTGAAAGAAGTGGTTTGAACCCTGCAACTCTTCTCGATGTGCTGGATCTTGGGGCCATAAGTAACGGCATGTTTAAATTGAAAGGACCTACAATGCTCCAAAATAGTTACTCCCCAGCTTTTCCGCTGAAGCACCAGCAGAAGGACATGAGATTAGCTCTTGCTCTTGGAGATGAAAATGCCGTGTCAATGCCAATAGCAGCTGCAGCAAATGAGGCTTTCAAGAAGGCCAGAAGCTTGGGGTTGGGAGACCTTGATTTTTCAGCAGTTCATGAGACTTACAAAGCTCCTGATCATTCATCTTGA 873 0.4353 MEVGFLGLGIMGKAMATNLLRHGFKVTVWNRTLSKCEELVQYGASVGETPATVVKKCKYTIAMLSDPSAALSIVFDKDGVLDHINGKGYIDMSTVDADTSSKISEAIKAKGGYFLEAPVSGSKKPAEDGQLVILAAGDKALYDEALPAFDILGKKSFFLGEVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLNPATLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSLGLGDLDFSAVHETYKAPDHSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00639 290 Gene3D - 163 285 IPR013328 GO:0016491
Phco1g00639 290 FunFam Glyoxylate/succinic semialdehyde reductase 2 163 287 - -
Phco1g00639 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 161 IPR036291 -
Phco1g00639 290 PIRSF HIBADH 1 290 IPR015815 GO:0016491
Phco1g00639 290 FunFam Putative oxidoreductase GLYR1 homolog 1 162 - -
Phco1g00639 290 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 3 157 IPR006115 GO:0050661
Phco1g00639 290 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 284 - -
Phco1g00639 290 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Phco1g00639 290 Gene3D - 1 162 - -
Phco1g00639 290 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 161 284 IPR008927 -
Phco1g00639 290 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 281 IPR029154 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00639 Phco-Chr1 5799281 5803718 Dispersed/Tandem