Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00632 ATGAGCTCTCAGTCACAACCTCAGCAACAAGGCAACCACAAGAACCGAGAAGAAGAGAAGGAAGAAGAAGAAAACCATTTGCTACAATCAGAATGCGAGACAATACCGTTGTCCTCACCCCATGTAACACCCTCAAACTGGGAACATGCTTACAAAGAAGTAGAAGTAGAAGAAGAAGAAGAGAAAGACACGGTGTATGCAGCCAAGGACAAGGTGCAGATATTTGACTTGGAGTCTTCCGGTAGCGCAGGGTCCACGGCGGTGCCGCCGTTTTCGTGGAGGAAGCTGTGGCTGTTCACGGGGCCAGGGTTGTTGATGAGCGTGGCGTTTTTGGACCCGGGGAACCTTGAAGGGGACCTTCAAGCTGGTGCAATTGCAGGGTACTCCTTGCTTTGGTTGTTGATGTGGTCCACCATCATGGGGTTGGTGATACAGCTTCTGTCGGCGAGGCTCGGGGTGGCGACCGGGCGGCACCTGGCGGAGCTGTGCAGGGAGGAGTACTCCAATTGGGCCAGGTTGGTGCTGTGGATCTTGGCTGAGCTGGCTCTCATTGCTGCTGATATTCAAGAGGTTATTGGCAGTGCTATTGCTTTCAAGATTCTTAGCCATGGGCTTATCCCCATTTGGGCTGGTGTGGTTATCACAGCCACGGATTGTTTCTTCTTTCTATTTCTGGAGAACTATGGAGTGAGGAAGTTGGAAGGTGTTTTCGCAGTTTTCATTGGAACTATGGGCCTTTCTTTTGCGTGGACGTTCTTTGATACAAAACCCAGTGAAGAAGAACTATTGATGGGTCTTTTAATCCCAAGACTTAGTTCAAAAACTCTTCGTCAGGCTGTGGAAATTGTGGGGTGTGTGATAACCCCACATAATGTGTTCCTCCATTCTGCATTGGTACAATCAAGGGACATTGATATCCGTAACAAAGGCCAGGTTCAAGAGGCTCTCAACTACTACTCAATTGAGTCCTCAGTTGCACTTTTAGTGACATTGGTGATCAATCTATCTGTGATAACAGTTTTTGCTAGGGTGTTCTATGGTACAGAACAGGCCAATGGCATAGGATTGGTAAATGCAGGGCAATATCTGGAGGAGAGGTATGGGGGAGGGTTGTTTCCAATTCTCTATATATGGGGTATTGGTTTACTAGCAGCTGGCCAAAGTAGTACCATAACTGGCACATATGCTGGCCAGTTTATAACAGAGGGTTTTCTTAAGCTCAATATAAAGAAGTGGTTGAGGGCATTGATCACTAGAAGTTGTGCAATTGTTCCAACTATGATTTGTGCCATTGTTTTTAATACATCAGAAAGTTCATTGGATACCTTGAATGAATGGCTTAATGTGGTCCAAGCAATACAGATTCCTTTTGCACTTATCCCCCTTCTTACTTTGGTGTCCAAAGAGGAGGTCATGGGGTCCTTCAGAATAGGGCCTATGGTAGAGAAAGTGGCTTGGAGTGTGGCTGTGCTGGTAATATTGGTTTATGGATATATGTTATTAGATTTCTTCCTGGATGAAGTTGATGGAGTATTGTTTGGTTTTCTAGTCTTCCTTGGCGCTTTGGCATGGATTTCATTTATTATATATTTGGTTCAACATAGTGGTGCCATTCCTTCAATCATGGTGAGGTCCCCTAATTCAAGAGGCTTTTTCTCTCTTTCTGGGAACTAA 1674 0.4558 MSSQSQPQQQGNHKNREEEKEEEENHLLQSECETIPLSSPHVTPSNWEHAYKEVEVEEEEEKDTVYAAKDKVQIFDLESSGSAGSTAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLVIQLLSARLGVATGRHLAELCREEYSNWARLVLWILAELALIAADIQEVIGSAIAFKILSHGLIPIWAGVVITATDCFFFLFLENYGVRKLEGVFAVFIGTMGLSFAWTFFDTKPSEEELLMGLLIPRLSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEALNYYSIESSVALLVTLVINLSVITVFARVFYGTEQANGIGLVNAGQYLEERYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMICAIVFNTSESSLDTLNEWLNVVQAIQIPFALIPLLTLVSKEEVMGSFRIGPMVEKVAWSVAVLVILVYGYMLLDFFLDEVDGVLFGFLVFLGALAWISFIIYLVQHSGAIPSIMVRSPNSRGFFSLSGN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00632 557 MobiDBLite consensus disorder prediction 12 29 - -
Phco1g00632 557 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 20 533 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 Coils Coil 13 33 - -
Phco1g00632 557 MobiDBLite consensus disorder prediction 31 45 - -
Phco1g00632 557 Hamap Divalent metal cation transporter MntH [mntH]. 82 504 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 NCBIfam Nramp family divalent metal transporter 101 470 - -
Phco1g00632 557 PRINTS Natural resistance-associated macrophage protein signature 386 405 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 PRINTS Natural resistance-associated macrophage protein signature 414 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 PRINTS Natural resistance-associated macrophage protein signature 448 467 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 PRINTS Natural resistance-associated macrophage protein signature 175 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 PRINTS Natural resistance-associated macrophage protein signature 205 224 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 PRINTS Natural resistance-associated macrophage protein signature 230 251 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 PRINTS Natural resistance-associated macrophage protein signature 279 302 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 94 472 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00632 557 MobiDBLite consensus disorder prediction 1 46 - -
Phco1g00632 557 Pfam Natural resistance-associated macrophage protein 117 478 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00632 Phco-Chr1 5672294 5676095 Transposed