Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00627 ATGACCGTTAAATTAATCCAACGGCGAACAAATGAGGGGGAGAGGAAGGGTGTTGTAGAGGATCCTAACCCCTGGTTTCTCCCCTTTTGTCATCCTGATTCAACCTTTTCTTTCCAAGACACTCACTCTCTCACTCTAACAAATCTTCTTCCCACCTCTCTCTCTCCTTCTCTCTCTCTCTCTCACATTTGGCAAGAGAGAGAAACAGTGACAGAAACACAGCACATGAGAGAGATGAAGAAGCAGCACAGCACAATGTGCAGCAGCAGTGGCAGCTTCATCCTCACCCTCTTCCTCCTCATTGGACCAATCCTCTCCCATTCCTCTTGCACACCCATCAACAGAAGGATCCTCCACCAACCCTTTCTGCCTGAAGGGGCTTCCCCACCTCCCTCACTTCCCCCAAGCCCCCCTCCACACCCTTCTCCTTCACCTTCACCTCCAAACCCAAAGTACCCATTTTCCACCACACCCACCAACAATGCTTCAACACCCTTCTTCCCCACATACCCTTCTCCCCCACCTCCTCCTTCTCCTTCAGCCTTTGCTTCTTTCCCTGCTAACATATCCTCCCTCATCCTTCCCCAATCCCCCAAGTCCAAATCTTCCTCCAAAAAACTCGTTGCCGTCACCATCGCCGCCGTCGCCTGCGCCCTGGCCGTTCTTGTTCTCTCCGCCTTTGTCTACTTCCGCCGCCGACGTCAAAGCTACTCTGCTGACGAGAAAACCCTCAGATCCGACAGCAGCATCCGCCTCTTCCCCCGTGAAGCTTCTGCTGCCGCTGGCGGCGGCCGCAAACCAAGAAACACCTCTTCTACCAGCTCTGAGTTTCTCTACCTTGGCACCATTGTTAACTCCCGTGGCGGCAGCGTCGATGAGCTCTCTGACCCGCATGCCGCCGCGTTGAACCCTCGGAAAATGGACTCGCCGGAGCTTCAACCGCTACCGCCGCTGGCAAGACAGGCTTCCAGGCTTAGAGAGGAAACGGCGGCGATGGTGGAGGAGGATGAAGAGTTCTACTCGCCGAGAGGGTCGTTGAACGGAAGAGAAGGCTCCACCGGAACCGGATCGGGTTCCCGGCGAGTTTTCTCCGCCATTGCTGGTGAAAATTTAGTTGGTCGTAGCAGCAGTGAGTCAACCAGTTCTTCTTACTCTTCTTCCTCTTCACCTTCCCCGGATCGCTCTCATTCCATTAGTCTCTCTCCTCCAGTGAGCATAAGCCCCAGAAGATCACAACCCAAGTCGCCTGAAAATACCATAGCCCACCATTCCCCACCGCCACCTCCAGCAGCAATTAGAAGATCTCCGTCCTTGTCCTCACTATCATCGCCTTCACCGGCTTTCGGGCAGCACATGCCGTCGTCGTCAATGTCGTCCACGCCGGAGCGGAGGGACTGTCAGTCGCCGTCGCTGTCTCCGCTTACTCTGTCGCCGAGGAAAAACCCAATCCCAGATGGTGAATCAACCCCAGGACTTGTTCTACTCGAAAAGACGCAATCTTTTGGTTCGTCTAAGTCCAAAAGCGACAGTGGGTCGCCGAGATTGTCCAATGCTTCTTCCATTGGAAAGTCCTCGGCGTTTTCTCTGCCCTCGCCGGATAAAGGGATGAACTTGCATCATGGGTTGGATCAGTCTCCGACCATATCCGATGTTTCTGATCGGTTTAGACATTCTCCTCTGTCATCATTACCTTTGTCACCGACATTACTTTCATCGCCGGAGAGGGAGTTGAGTCCTAAGCCTCAGCCTCAGCCTCAGCCTCAACCTCAACTACCACCTTCACGGAAACACTGGGAGATTCCTGACTTGTTGACACCAATCGGCGAAACACCGATTTTCTCAGCCCCTCAGAGAAAACAATGGGAAATTCCGGTTTTTTCAGTACCAATTGTTCCATCTAGTACCAGTGTTTTAGCCCCTCCACCGCCGCCACCACCACCACCACCACCACCTCCGCCAGTTCCGCGGCAACGTAAGCAGTGGGATATGCCAGTGCCTTCTCCCGTGACGCCAGTGGGTCAGCAGGTTTCGAGGCCGCCGGCGCTGACGCCGCCTTCTAGGCCTTTTGTGTTGCAAACTCCAAATACAATGGTTTCTCCGGTGGAGTTGCCACCTGTTAGTTCTCTGAATTTTGAGGAGAGCTCCGAGGAGACATCTAAACCTAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCCAGCTCTGATCGTGAGATGGTGTGGGATCAGTTGAGGTCCAGCTCTTTTAAGTTGAACGAGGAGATGATTGAAACTTTGTTTGTAGTGAACACTCCAAAACCAAAACCTAAGGACACAGCTCCTCGACAAGTTCTTGCTCGGCATAATCAAGAGGATAGGGTGCTGGATCCTAAAAAGTCCCAGAACATTGCTATCTTGTTAAGAGCACTTAATGTGACTGTAGAAGAAGTGTGTGAATCACTTTTAGAAGGCATTACTGATACACTTGGAACTGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAGGAAGAACGCAAATTGAAGGAACATAAAGACGATTCTCCAACCAAGCTTGGTCCTGCTGAGAAATTCTTGAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGTCAATTTTGAGTCCGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTTTGGAGGCTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTCAAAACTGGCAACCGGATGAATGTGGGGACGAACCGGGGCGATGCACACGCATTTAAACTTGATACACTTCTCAAGCTTGTTGATGTCAAAGGCGCAGATGGCAAAACCACTCTACTTCACTTTGTTGTACAAGAAATCATCAGAACTGAAGGTGCTCGTCTCTCAGGCACCAACCAAACACCAAATGCGAACTTGAACGATGATGTCAAGTGTAGACGGCTCGGCCTGCAAGTAGTGTCCGATCTGATTTCCGACCTGACCAATGTGAAGAAGGCCGCCGCAATGGACTCTGAAGTCCTAAGCAGCGAGGTCTCCAAACTCTCCAAAGGAATGGCACACATTGCAGAGGTTGTGAAGTTGAATGAAGCAGCAGGGTCAGATGAAAGCAGGCAGAAGTTCAGAGAGTCAATGAACAAGTTCACGAGAATGGCTGAAGAGGAGATTTTAAAAGTGCAAGCACAAGAAAGTGTTGCTTTATCCCTTGTGAAGGAGATCACAGAGTATTTCCATGGGAACTTGTCCAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTGAGAGACTTCTTAACAGTTCTTGATAGGGTGTGCAAAGAAGTTGGCATGATAAACGAGAGAACCATGGTTAGTTCTGCACATAGATTCCCTGTCCCAGTGAACCCTATGCTTCCACAACCCCTTCCAGGTCTTGTTGGAAAGAGACAATACAATTCCTCAGATGATGATGATACTGCATCTCCTTAG 3501 0.503 MTVKLIQRRTNEGERKGVVEDPNPWFLPFCHPDSTFSFQDTHSLTLTNLLPTSLSPSLSLSHIWQERETVTETQHMREMKKQHSTMCSSSGSFILTLFLLIGPILSHSSCTPINRRILHQPFLPEGASPPPSLPPSPPPHPSPSPSPPNPKYPFSTTPTNNASTPFFPTYPSPPPPPSPSAFASFPANISSLILPQSPKSKSSSKKLVAVTIAAVACALAVLVLSAFVYFRRRRQSYSADEKTLRSDSSIRLFPREASAAAGGGRKPRNTSSTSSEFLYLGTIVNSRGGSVDELSDPHAAALNPRKMDSPELQPLPPLARQASRLREETAAMVEEDEEFYSPRGSLNGREGSTGTGSGSRRVFSAIAGENLVGRSSSESTSSSYSSSSSPSPDRSHSISLSPPVSISPRRSQPKSPENTIAHHSPPPPPAAIRRSPSLSSLSSPSPAFGQHMPSSSMSSTPERRDCQSPSLSPLTLSPRKNPIPDGESTPGLVLLEKTQSFGSSKSKSDSGSPRLSNASSIGKSSAFSLPSPDKGMNLHHGLDQSPTISDVSDRFRHSPLSSLPLSPTLLSSPERELSPKPQPQPQPQPQLPPSRKHWEIPDLLTPIGETPIFSAPQRKQWEIPVFSVPIVPSSTSVLAPPPPPPPPPPPPPPVPRQRKQWDMPVPSPVTPVGQQVSRPPALTPPSRPFVLQTPNTMVSPVELPPVSSLNFEESSEETSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPKPKPKDTAPRQVLARHNQEDRVLDPKKSQNIAILLRALNVTVEEVCESLLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIVNFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPNANLNDDVKCRRLGLQVVSDLISDLTNVKKAAAMDSEVLSSEVSKLSKGMAHIAEVVKLNEAAGSDESRQKFRESMNKFTRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVGKRQYNSSDDDDTASP 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00627 1166 MobiDBLite consensus disorder prediction 632 685 - -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 124 154 - -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 542 577 - -
Phco1g00627 1166 ProSiteProfiles Formin homology-2 (FH2) domain profile. 713 1138 IPR015425 -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 333 603 - -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 635 659 - -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 370 419 - -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 493 531 - -
Phco1g00627 1166 Gene3D Formin, FH2 domain 709 1121 IPR042201 -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 1145 1166 - -
Phco1g00627 1166 SUPERFAMILY Formin homology 2 domain (FH2 domain) 643 1124 - -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 578 594 - -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 435 477 - -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 346 360 - -
Phco1g00627 1166 Pfam Formin Homology 2 Domain 715 1112 IPR015425 -
Phco1g00627 1166 PANTHER FORMIN-RELATED 500 1152 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Phco1g00627 1166 SMART it6_source 713 1127 IPR015425 -
Phco1g00627 1166 MobiDBLite consensus disorder prediction 121 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00627 Phco-Chr1 5597319 5601962 Transposed