Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00536 ATGGCTACCATAACTCGTGTTTTTCTCTGCTTTTCCAGCATCATTATCCTTAACCTCGTTCATACGTTGGCTCAATCTCATAACTATATCATCCACATGGACGCATCAGCCATGCCAAAAGCATTTTCCACCCAACACGCTTGGCATTTGTCCACTCTTTCCTCTGTATTAGATAATGCAGATACATCCAATCATAATAATCTTAACACTGCATATTCTAAACTCATTTACACCTACACCAACGCCATGAATGGTTTTAGTGCAAATTTGTCCCCAAAGGAATTTGAAGCTCTCAAAAGGTCCCCGGGTTACGTTTCTTCCACACTAGATCTGCTAACCAAGCTTGACACATCACACTCGCCAGAATTCCTTGGCCTCAATCCCAACACGGGAGCTTGGCCGGCTGCGAAATTTGGTGAAGATGTCATCGTTGGTTTGGTGGACTCTGGAGTATGGCCAGAAAGTGAAAGCTTCAACGATGAAGGGCTTCCTGATAAACTTCCCTCACGATGGTATGGCAATTGTGAAAGTAGCATCAAATGCAACAGGAAACTCATTGGAGCTCGATTCTTTAACAAAGGGTTTGTTGCCCAGCAAGCACAATTGTCCACAATTGTGAACTCAACCAGGGACACGGAAGGTCATGGGACGCACACATCTTCCACCGCAGTTGGGAGTCAAGTTGACAATGCATCATTCTTTGGATATGCCAATGGATCAGCGAAAGGAGTAGCTTCAAGGGCCAGATTGGCCATGTACAAGGTTGTGTGGAATGATAGGATTTACACATCTGATGTAATGGCTGCAATTGATACTGCAATATCAGATGGGGTTGATATTCTTTCCTTATCACTTGGCTTTGATGATGCAACCTTGTCCGATGACGCTGTTGCTATTGCAACATTTGCAGCCATGGATAGAGGCATTTTTGTGGCCACGTCTGCAGGGAATGCGGGGCCTGGTCGTGGAACTCTACACAATGGAATACCATGGGTCACAAACGTGGCTGCTGGCACTTTGGATCGTGAATTTCACGGGACTCTAACTCTTGCCAATGGTGTCAACATATCTGGCTTGTCAATGTATCTAGGAAACTACTCAGCACATCAAGTTCCTATTGTTTTTATGGGCTCATGTGACGATTTAACGAAACTGGGCAATGCACGTAGCAAGATTGTGGTGTGTGAGGATATGGGTGGGAATATTGACAATCTAGCGTCTAATATAGACACTACAAATGTTTTGGCAACAGTGTTCATCTCAAGCGTCACCGACCTTTCAGTTTTTTTACAGCATAGTTTTGCAGGCATCATTATAAATCCGAGATATGGAGAAATTTTGAAAGCTTACATCAAGAGTAACTCTGATGCAAAAGCAAGCATGTCTTTTAAGATAACAGCTTTAGGTATTACACCGGCACCGAGTGTGGATTCTTACAGCTCTAGAGGACCATCAAATAGTTGTCCATTTGTGTTGAAACCTGACATCACCGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAATCTTCAGGTGGCACAGTTTGGAGCACAAACCCTTTACAATAACTTCAATTTTTTAACTGGAACATCCATGGCATGCCCTCATGTGGCAGGTGTGGCAGCATTGTTAAAAGGAGCACATCCTGATTGGAGCCCTGCAGTTATTAGGTCAGCCATTATGACAACATCTGATATATTCGACAATACTAAGAAACTCATTAAAGACATTGGTGAGGGAGACAAACCAGCTTCTCCTTTAGCCATGGGTGCTGGTCATATCAACCCCAACAAAGCCCTAGACCCTGGGCTTGTTTACGATGTGGGAGGTCAGGATTATGTCAATCTTCTCTGCGCAATGAACTTCACTCAAGAGAACATCAAAGCCATCACAAGATCCTCTTCCTACAATTGTTCCAAACCTTCCTTGGATCTTAACTACCCTTCTTTCACTGCTTTGTTCAATGGTTCTTCTAAGGAGTCAAGGATAACTTGGGAATTTGTTAGAACAGTGACCTATTTTGGGGAGGGACAAACAATCTATACTGCTAGCATTACACCAATCAAAGGGTTTAATGTCAGCATCATCCCAAGCAAGTTGGTGTTCAAGGAGAAGAACGAGAAGCTAAGTTTCAAGTTAAGAATTGAAGGTCCAAAGATTGAAGGTTTTGGGTACATCACTTGGACTGATGTGAAACATGTGGTCAGGAGTCCTATTGTGGTCATCAATCAAGCATCTTCACAATAA 2250 0.4329 MATITRVFLCFSSIIILNLVHTLAQSHNYIIHMDASAMPKAFSTQHAWHLSTLSSVLDNADTSNHNNLNTAYSKLIYTYTNAMNGFSANLSPKEFEALKRSPGYVSSTLDLLTKLDTSHSPEFLGLNPNTGAWPAAKFGEDVIVGLVDSGVWPESESFNDEGLPDKLPSRWYGNCESSIKCNRKLIGARFFNKGFVAQQAQLSTIVNSTRDTEGHGTHTSSTAVGSQVDNASFFGYANGSAKGVASRARLAMYKVVWNDRIYTSDVMAAIDTAISDGVDILSLSLGFDDATLSDDAVAIATFAAMDRGIFVATSAGNAGPGRGTLHNGIPWVTNVAAGTLDREFHGTLTLANGVNISGLSMYLGNYSAHQVPIVFMGSCDDLTKLGNARSKIVVCEDMGGNIDNLASNIDTTNVLATVFISSVTDLSVFLQHSFAGIIINPRYGEILKAYIKSNSDAKASMSFKITALGITPAPSVDSYSSRGPSNSCPFVLKPDITAPGTSILAAWPQNLQVAQFGAQTLYNNFNFLTGTSMACPHVAGVAALLKGAHPDWSPAVIRSAIMTTSDIFDNTKKLIKDIGEGDKPASPLAMGAGHINPNKALDPGLVYDVGGQDYVNLLCAMNFTQENIKAITRSSSYNCSKPSLDLNYPSFTALFNGSSKESRITWEFVRTVTYFGEGQTIYTASITPIKGFNVSIIPSKLVFKEKNEKLSFKLRIEGPKIEGFGYITWTDVKHVVRSPIVVINQASSQ 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00536 749 SUPERFAMILY Subtilisin-like 115 605 IPR036852 GO:0004252|GO:0006508
Phco1g00536 749 FunFam Subtilisin-like protease SBT1.9 18 116 - -
Phco1g00536 749 Gene3D - 341 468 - -
Phco1g00536 749 Gene3D - 618 744 - -
Phco1g00536 749 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 742 IPR045051 -
Phco1g00536 749 Gene3D Peptidase S8/S53 domain 141 614 IPR036852 GO:0004252|GO:0006508
Phco1g00536 749 Pfam Peptidase inhibitor I9 29 111 IPR010259 -
Phco1g00536 749 CDD PA_subtilisin_like 347 460 - -
Phco1g00536 749 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Phco1g00536 749 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Phco1g00536 749 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Phco1g00536 749 FunFam Subtilisin-like protease SBT1.5 141 352 - -
Phco1g00536 749 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Phco1g00536 749 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 115 IPR037045 -
Phco1g00536 749 ProSiteProfiles Serine proteases, subtilase domain profile. 120 601 - -
Phco1g00536 749 Pfam Subtilase family 139 572 IPR000209 GO:0006508|GO:0008236
Phco1g00536 749 Pfam Fibronectin type-III domain 645 742 IPR041469 -
Phco1g00536 749 CDD Peptidases_S8_3 114 566 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00536 Phco-Chr1 4331314 4333563 Tandem