Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00513 ATGGAGATTGTAGGATTCGGTTTTCGTCCCACAGAAGAAGAACTTGTGGACTATTACCTCAAACATAGGTTGCTCGGTGATGATCCACATGTCCACGTCATCCCTGACATTGACCTTTGTGAGGTGGAACCTTGGGACGTACCAATGTTATTAGCGAAATCAGCTGTACAATTCGATCTCCCAGAATGGTTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAATAGTAAAAGGGTTAACAGAACAACTAAATGTGGCTTCTGGAAACCTACTGGAAAAGATCGTGAGATTAGGAGCTTGGACACAGACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTATAAAGGCCGTGTTTCCCGTGGTTTCAAGTCCAACTGGATTATTCATGAATACCATGCTGTTACCTTTCACGAAAACCAGAGGACTTCTGTTTTATGTCGCCTGATGAAGAAACCTGGGACAACAACTGAAGGTGGAGGTGAAGCACTGACCTGTGATGAAGGGGAGAGCAGTAGAGTCATGGTTTCTGGCTATGAAAATGAGGCAATAGAAGGGGGGATTCCTTCAATAGGTACTTCTGCAGGAATAGAGACGACCTTTCAGACTATGCATCAAAGATATAATTACTTCTCCCCAATGCAACAGTCTCCAATTGGTATTGAGCAAGAGGAAGCTTCTCTTCCAAACTCCCCATTTTACAGTGCCCATTCTAGAAATGAATTCAACAATATGCAGATTCCATTTGAAACTACCCAGGAGGAGGAGCAATTCCTGAATTCTGTTTTTGTTGATGAGAGAGAACTTGGAAACCAGATGCCATCGATCTTCTGA 834 0.4257 MEIVGFGFRPTEEELVDYYLKHRLLGDDPHVHVIPDIDLCEVEPWDVPMLLAKSAVQFDLPEWFFFSPVDFKYSNSKRVNRTTKCGFWKPTGKDREIRSLDTDTLIATKKTLVYYKGRVSRGFKSNWIIHEYHAVTFHENQRTSVLCRLMKKPGTTTEGGGEALTCDEGESSRVMVSGYENEAIEGGIPSIGTSAGIETTFQTMHQRYNYFSPMQQSPIGIEQEEASLPNSPFYSAHSRNEFNNMQIPFETTQEEEQFLNSVFVDERELGNQMPSIF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00513 277 Gene3D NAC domain 11 156 IPR036093 GO:0003677|GO:0006355
Phco1g00513 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 215 - -
Phco1g00513 277 ProSiteProfiles NAC domain profile. 2 152 IPR003441 GO:0003677|GO:0006355
Phco1g00513 277 Pfam No apical meristem (NAM) protein 4 133 IPR003441 GO:0003677|GO:0006355
Phco1g00513 277 SUPERFAMILY NAC domain 4 152 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00513 Phco-Chr1 4067768 4069728 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco1g00513 NAM 2.7e-27 No_clan