Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00431 ATGTCAAGTTTCTCCAACACCGTGTCGGAAGCCCGGAGGTCTGGCAAGGCACCGGAAAAATCCTCTTTTTCTCAGACTTGCAGTCTCTTGAGCCAGTTCTTGAAGGAGAAACGAGCTTCTGGTGACTCCACCCTTGGAATGGTTGGGAAAATGGAACCTAAAGCGAGTACGAAGGATTTGTTTGGCAGCCTGCAAAACTCAGATGGGGCTTTGAAACTAAGCGCTTCTGTCATGGATTTTCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGTCTAATCTTAGCTCATCGGTTCCTGAATCTCCTCAAATGACAATATTCTATGCTGGAAAAATGTTGGTATTTGATGCTTTTCCTCCGGAGAAGGCAACAGAGGTCATGGAGTTGGCCACCATGCTGGCGTCGGACACTTCCGGCGCCGAAGAAACTCCCCCTAGTGCTCCGGTTACTACTAAAGAATTAGCTGAGGCCGAAGTACCACAAACAAACACCTCAGAAACCCCTAAGCTCGGAAGCCAAGGGGTTGGTTCAGATATGAGATATCCAAGAAGAGCTTCACTTCTAAAATTTCTTGAGAAAAGAAAAGAAAGGGTTATTGCAAGAGGGCCTTACCAAATGAACAACCAGAAACCAGAGGGGAGCAGTTCAGGGGGTGATCCTGAAGATCAGTGTTCTAAACAGTTTGACCTTAACTTGTAG 702 0.4672 MSSFSNTVSEARRSGKAPEKSSFSQTCSLLSQFLKEKRASGDSTLGMVGKMEPKASTKDLFGSLQNSDGALKLSASVMDFLPQLVENPCIKKSNLSSSVPESPQMTIFYAGKMLVFDAFPPEKATEVMELATMLASDTSGAEETPPSAPVTTKELAEAEVPQTNTSETPKLGSQGVGSDMRYPRRASLLKFLEKRKERVIARGPYQMNNQKPEGSSSGGDPEDQCSKQFDLNL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00431 233 MobiDBLite consensus disorder prediction 136 182 - -
Phco1g00431 233 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Phco1g00431 233 Pfam tify domain 100 131 IPR010399 -
Phco1g00431 233 Pfam Jas motif 184 206 IPR018467 -
Phco1g00431 233 MobiDBLite consensus disorder prediction 208 233 - -
Phco1g00431 233 MobiDBLite consensus disorder prediction 199 233 - -
Phco1g00431 233 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 216 IPR040390 -
Phco1g00431 233 SMART tify_2 98 133 IPR010399 -
Phco1g00431 233 MobiDBLite consensus disorder prediction 1 25 - -
Phco1g00431 233 MobiDBLite consensus disorder prediction 157 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00431 Phco-Chr1 3434141 3436058 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phco1g00431 tify 4.3e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00431 1 3434141 3436058 Phco1g00431 1 3434141 3436058 ECH