Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00392 ATGGGCTCTCGAGGAAGGCCATTATTTGATCTCAATGAACCGCCTGCAGAGGATAATGATGATAGAGATGGTATTGTCTGCATCCAGCCCCAAAAGACACACCCATCGACAAATCCCCATGCCTCTGATTTATTTCCAACATCAACTGCTGCCCAAGGAATAATAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATCCACTGGTGTGCCTGAATCAGATGCTGAATTGAAGAGAGTAGGAGATCAGGACACAAAGGTTTCCTCCAAGTCAAGTAAAGATGAAGATGTGAAAGTTATGGATTCACGGATACTAAGTTCAACAAATGCCCAATCTACTGAGAGGGAAGAAGGGGAATGGTCTGATGAGGACGTTTTTGCTAATGCAAATGGAGGTAATAATCCTATTGCAAATGGGGGTAATAATGCTAATGCAAATGTAGGTAATAATTTGCCACAACGAAGTAAAGCTTCAGAAGAGCTAGCAACATCTGGAATGGTCGATGTGAGTGTTGTGGTTGCGTCTGACAGTAAACCTAGAAATATTAAGAGTTCTGATAGTATAAATGATGAAAGGGGCAGTCAAGCTTCTATAGGTCTAGAATCAAATTCGAGTGAGCAGAAAAACAATAGTATTCCAAATTCAGAAAGCAATATAAAAAGTGAAACCTCTAGTGATGCACTGGAGGAACCCACTTTAGTTCCCAAGCAAAAAGAAGTGAAAGGTATTGAAGCAAGTCATGCACTTAGGTGTGCAAATAATCCAGGGAAGAGGAAGATTGACCAACGTAAAGAGGAAATGTTGGGAAAGAAACGAAATAGACAGACAATGTTTCTTAACTTAGAAGATGTTAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGGCAAACTTTCTCATCATCATCTGTTGTTAGTCGTACAATAAAGGAAGTCCGCACTATTCCCGCACAAATTGAGCGTGTTGGAATAGCTAAGGATCAGAAGCTCATTGATACATCTTCTGGTGAAGGTGGCAACCATGCTGAAGCACAAGAACCTAAATCTTCTGATTGTAATGGCGATACTTCTGGACCACTTGTTAGATCCAGGAGGTTAAACAGTGAGACAGAACCTTCTGCAGAGGCCAATTTGCCACCAATTCCAAGACAGGGTTCATGGAAACAATTGACAGATTCGAGGCAGCAGAAGAACGCACTCCATTCTAATAGGAAGTTGGGGCTGAGTAGTCAAAGTTCTAATGATGTTAAATTAGGAAACAAGAAACATCTTTCTATCAAGAAGCAGGCTCCTATCAGCAGCCAGTCCCAGGACACATCTGTTGAGCGCCTTATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGAGACTGAGCTTCAGTGTGTTCCTGGACGGTTTGAATCAGTGGAAGAGTATGTTAGAGTATTTGAGCCTTTGCTTTTTGAGGAATGCCGTGCCCAACTTTATAGTACTTGGGAAGAATCAACTGAAACAGTGTCAAGGGATACTCATATTATGGTGCGTGTGAAGGCGAATGAGTCAAGGGAAAGAGGATGGTATGATGTTAAAGTTCTTCCAGTACATGAGTTCAAATGGTCATTTAAGGAGGGTGATGTTGCAATTCTTTCATCCCCCAGGCCTGGATCAGTTAGATCCAAGCAGAACAGTTCATCTGTAACTCAGGATGATGGGGAATCAGAAGTCACTGGACGAGTGGTTGGTACAGTTAGGCGTCACATACCTATTGATACCCGTGATCCTCCTGGTGCAATTCTTCATTACTATGTTGGAGACTCTTATGATCCCAGCAGGGTTGATGATGATCATATCATAAGAAAGCTTCTAAGTGGAAGCATCTGGTACCTCACTGTTCTCGGTTCTCTTGCTACCACACAAAGGGAGTATGTTGCCCTACATGCATTTCGTCGATTAAATTTGCAGATGCAAACCGCAATCCTTCAGCCTAGTCCTGAACACTTCCCTAAATATGAGCAACAGACCCCAGCCATGCCTGAATGCTTCACTCAGAACTTTGTTGAGTATCTGCGTAGGACCTTCAATGAACCCCAGTTGGCAGCAATCCAATGGGCAGCTACACATACAGCTGCTGGCACAAGTAGTGGATCAACAAAAAGGCAAGAACCTTGGCCGTTTACCCTCGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTGTGGGGAATGTTGAATGTCATTCACCTTGTTCAGTATCAGCACTACTACACCTCTTTGCTAAAGCATGTAGCCCCTGAGAGCTACAAGCAAGTCAATGAGATTAATTCTGATAATATCCCCACTGGATCTATTGATGAAGTTCTTCAAAACATGGACCAGAATCTCTTGCGAACCTTACCTAAATTGGTCCCAAAACCTAGAATGTTAGTCTGTGCTCCGTCTAATGCTGCCACTGATGAGCTTCTAGCTCGTGTTCTTGATCGTGGATTTATTGATGGGGAGATGAAAGTTTATCGACCTGATGTAGCTCGAGTTGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTTTCTGTCGAGCGCAGAACTGAACAGCTTTTAATCAAGAGTCGGGAAGAAATTATGGGATGGATGCACCAGTTAAAGAATCGCGAGGCGCAGTTGACTCAGCAGTTGCATTGTCTCCACAGAGAACTTAATGCAGCTGCTGCTGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCCGAGATCAGAATCGAGATGCTTTGCTGCAGAACCTTGCTGCAGTTGTTGAAAATCGGGACAAGGTTCTGGTTGAGATGTCTCGCCTAGCACTTCTTGAAAGTAGGTTTCGACCTGGTAGTGGATTTAATTTGGAAGAAGCTCGTGCTAGTTTGGAGGCCAGTTTTGCAAATGAAGCAGAGATTGTTTTCACTACAGTTTCTAGCAGTGGCCGTAAGTTGTTTTCTCGTCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGTGAGGTGGCAATTCTGCCTCCCCTCTCTCTTGGTGCAGCTCGTTGTGTCCTTGTTGGAGATCCTCAACAGCTTCCTGCTACAGTTATAAGCAAGGCTGCTGGAACATTGATGTACAGTAGGAGTCTTTTTGAAAGGTTCCAACAAGCAGGTTGCCCGACAATGTTGTTGTCTGTGCAGTACAGAATGCACCCTCATATTCGGGATTTCCCTTCTAGGTACTTCTATCAGGGGCGCCTTACTGATAGTGAAAGTGTCGTTAAACTGCCTGACGAGCCATACTACAAGGACCCTTTACTTAAACCTTATATATTCTATGATATCAGACATGGGCGCGAATCTCACAGAGGTGGATCGGTCTCTTATCAAAACATACATGAAGCACAATTTTGTCTCAGATTGTATGAGCATGTTCAGAAAACGGTCAAGTCTTTGGGTGTAGGAAAAATTACTGTTGGCATAATTACTCCTTATAAGCTGCAGTTGAAATGCCTCCAGCGTGAGTTTGACGAAGTGTTAAATTCAGAAGAAGGGAAAGATCTATATATCAATACAGTAGATGCCTTCCAAGGTCAAGAACGGGATGTCATTATAATGTCTTGTGTGCGTGCATCTAGTCATGGTGTTGGCTTTGTTGCAGATATTCGGCGGATGAATGTTGCCCTTACACGGGCAAGAAGGGCCCTTTGGGTCATGGGAAATGCGAATGCTCTGGTGCAATCTGAAGATTGGGCTGCATTGATTAATGATGCAAAATCTCGAAAATGCTATATGGACATGGACTCTCTTCCTAAAGACTTCCTGGTGTCCAAGGGACCTGTTTACACATCATTGCCCAGTAAGCCTTCTTCAAATATGAGGGGCATGAGATCAGCTGGACCAAGATATAGATCAATGGATATGCATATGGAGTCCAGGTCGGGAGCACCATCTGAAGATGACGAGAGTATGGGTGCTCCAATTGGCTCTAGAAACGGGAACCATCGCCAATCACGGTTTTCAATGGAGAATTCCTTTGATGATTTTGATCACGGGGGTGACAAATCCAGAGATTCTTGGCAATATGGTATACAGAAGAAACAGAACTCATCTGGACCCATGGGAAAGAGAGACAGTCAAAAGCTTGTCTCGGCCGTGATATTGGGGCTTTCGGCAAAGCTGTATGAGCCACAAGATTCTCAGCCTTGGAAGAGGGAGGTGCATGCAATGGATGGATGTGTTGGACAGATGCTTGTGTTGGCTCTGACAAATTTGGGCACATAG 4323 0.4409 MGSRGRPLFDLNEPPAEDNDDRDGIVCIQPQKTHPSTNPHASDLFPTSTAAQGIINNHAFSHASSVSGFQPFVRPKSTGVPESDAELKRVGDQDTKVSSKSSKDEDVKVMDSRILSSTNAQSTEREEGEWSDEDVFANANGGNNPIANGGNNANANVGNNLPQRSKASEELATSGMVDVSVVVASDSKPRNIKSSDSINDERGSQASIGLESNSSEQKNNSIPNSESNIKSETSSDALEEPTLVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQTFSSSSVVSRTIKEVRTIPAQIERVGIAKDQKLIDTSSGEGGNHAEAQEPKSSDCNGDTSGPLVRSRRLNSETEPSAEANLPPIPRQGSWKQLTDSRQQKNALHSNRKLGLSSQSSNDVKLGNKKHLSIKKQAPISSQSQDTSVERLIREVTSEKFWHHPEETELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNSSSVTQDDGESEVTGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLLSGSIWYLTVLGSLATTQREYVALHAFRRLNLQMQTAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSGSTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDNIPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCLHRELNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQNLAAVVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVVKLPDEPYYKDPLLKPYIFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGVGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALINDAKSRKCYMDMDSLPKDFLVSKGPVYTSLPSKPSSNMRGMRSAGPRYRSMDMHMESRSGAPSEDDESMGAPIGSRNGNHRQSRFSMENSFDDFDHGGDKSRDSWQYGIQKKQNSSGPMGKRDSQKLVSAVILGLSAKLYEPQDSQPWKREVHAMDGCVGQMLVLALTNLGT 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00392 1440 Coils Coil 885 905 - -
Phco1g00392 1440 Gene3D - 1081 1287 IPR027417 -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 137 170 - -
Phco1g00392 1440 CDD SF1_C_Upf1 1083 1272 IPR047187 -
Phco1g00392 1440 Pfam AAA domain 1059 1255 IPR041679 -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 344 385 - -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 337 428 - -
Phco1g00392 1440 CDD DEXXQc_SETX 700 1082 - -
Phco1g00392 1440 Gene3D - 636 1080 IPR027417 -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 68 317 - -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 395 428 - -
Phco1g00392 1440 Pfam AAA domain 700 1052 IPR041677 GO:0004386
Phco1g00392 1440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 699 1284 IPR027417 -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 559 583 - -
Phco1g00392 1440 PANTHER DNA2/NAM7 HELICASE FAMILY 240 1363 IPR045055 -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 561 579 - -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 81 111 - -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 301 317 - -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 264 288 - -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 1 23 - -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 1322 1351 - -
Phco1g00392 1440 FunFam P-loop containing nucleoside triphosphate hydrolase 1081 1287 - -
Phco1g00392 1440 MobiDBLite consensus disorder prediction 187 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00392 Phco-Chr1 3070204 3076761 Dispersed/Transposed