Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00384 ATGCCTTACAGTTATTCTTCTCGTGTTTCTAATATAATCGCATTTCTTCTATTTGTTTCTCTCTTCCCGGCAAAGCCAACAGTAGAAAATAGTTTGTGGTGTCCACTCACATCTTCTGCTTCTTCCAGTGACACCCTTCAATCAAAGTACGATGTCTTTGTTAGCTTTAGAGGTCCAGATGTTCGTGAAGGTTTCCTTAGCCATTTGATCGAGGCCCTTTCTCTAAACCAGATTGTTTCCTTTGTAGATTACAATATTCCCAAAGGACATCAAATATCTGATGCACTTCCAAGAGCAATTGAGGAATCTGCTAATCTAGCAGGATTTCATTCATCTACTTTTCGGGATGATGCTAAGCTTGTTAAAGAGATTGTTAAATGTGTATCGTCAATGGTGTTGAATCTCAGACTTAAAGTTAATTCTAAAGAGCCGTATGAAATTGGTACACAGTTTCCACATGCAGAAACATTTCTGCAATTAAAGTCCGAAGATCTTCCAGTTATTGGATGTATTGATCTTTGTAATGTTGAACCACACATCCGAATCATTTCTACTGGAGTTGAGAGGGTTTCAGGTTAG 579 0.3817 MPYSYSSRVSNIIAFLLFVSLFPAKPTVENSLWCPLTSSASSSDTLQSKYDVFVSFRGPDVREGFLSHLIEALSLNQIVSFVDYNIPKGHQISDALPRAIEESANLAGFHSSTFRDDAKLVKEIVKCVSSMVLNLRLKVNSKEPYEIGTQFPHAETFLQLKSEDLPVIGCIDLCNVEPHIRIISTGVERVSG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00384 192 ProSiteProfiles TIR domain profile. 48 169 IPR000157 GO:0007165
Phco1g00384 192 SMART till_3 49 168 IPR000157 GO:0007165
Phco1g00384 192 Pfam TIR domain 49 139 IPR000157 GO:0007165
Phco1g00384 192 Gene3D - 47 106 IPR035897 -
Phco1g00384 192 PANTHER TMV RESISTANCE PROTEIN N-LIKE 44 145 - -
Phco1g00384 192 SUPERFAMILY Toll/Interleukin receptor TIR domain 39 139 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00384 Phco-Chr1 2990345 2992263 Dispersed/Proximal