Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00377 ATGGAAATGGATCTCTACCCTGGGTTTCTGGTAATTGGAACACTGGTAATTTCTTTCACATTCTTCACTTTGATCATGCTAGGATGGTGCTTGGATATCAATCACATACGATCCCTTCCTACAACAGTCTTATCTTTTGATGACAAGTTCTCTCCTTGCATGAGTTTGGAGTCTCATTCGATTACCTTCCACTACAAGGCTGCAGAAGGCACAAACCAGACTGAATGTGTTATCTGCTTGACAAGTTTTGAAGAAGAGGAAAGTGTACGGAAGCTTCACACTTGCAAGCACATCTTCCACACCTTTTGCATAAACAAGTGGCTTGGCTCTCATTCAGGTTGTCCACTGTGCCGCACTCAGATTGATAAAGTGAATTCCCAAAACAGTAGAGTGGCTTTGGAAGAAAATGATCACATGATCATGGTCATTGTGAACTCCTGA 441 0.4218 MEMDLYPGFLVIGTLVISFTFFTLIMLGWCLDINHIRSLPTTVLSFDDKFSPCMSLESHSITFHYKAAEGTNQTECVICLTSFEEEESVRKLHTCKHIFHTFCINKWLGSHSGCPLCRTQIDKVNSQNSRVALEENDHMIMVIVNS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00377 146 SUPERFAMILY RING/U-box 65 124 - -
Phco1g00377 146 ProSiteProfiles Zinc finger RING-type profile. 76 118 IPR001841 -
Phco1g00377 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 128 IPR013083 -
Phco1g00377 146 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 10 128 - -
Phco1g00377 146 SMART ring_2 76 117 IPR001841 -
Phco1g00377 146 Pfam Ring finger domain 75 118 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00377 Phco-Chr1 2935137 2935577 Transposed