Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00371 ATGGGTAGGGTTTTGTTCTTCTCAAAAGGGACAGAGAGAGAAAGAGAGACGAAGAACAGGGAGAAAAGGAAGCGGCTTGGAGCGACAGATGCCTCTTCTCTACTAAACTACCATTATGCCCTTTGCTTAAACAAAATATTGCAAATCATTTTGAAAGGATTCACCAATAATGTCAAAACCAACACGTGGTTATTCATCATTATGGATTATTCATTTCATTTGGTGTTTCTACGCCGCTGTCTCCACCCTCACCTTGAGTTTCAGCAGAGACTTCTGATCTATCTCTCTACCTCCCTTTGTCCTTTGTTACGAAGGGAATACTATCTTCAATTCATCAGTATGTTTAGTTCATCAGGCATGGCAGATGGATCTGGTATGTTCAAGGTTCATCAAACAATTGGCAGTGTTTTGTGTTGCAAGTGTGGAATTCCAATGCAGCCAAATGCTGCTAATATGTGTGTGAAGTGTTTGAGCTCGGAAGTTGACATTACTGAAGGATTACTGAAGCGGCTAGTGCTGGTGCATTGTCCTGAGTGTGAGAGTTACTTGCAGCCACCAAGAACTTGGGTCAAGCTACAGCTAGAATCAAAGGAGCTTCTGACATTTTGCTTGAAGAAGTTGCAGAAAAATTTGAATTCGAGTAAAGTGAGGTTGGTACATGCCGAGTTTATTTGGACTGAACCCCATTCCAGGAGGGTAAAAGTCAAGGTCAAGGTTCAGAAGGAGGTTATCAATGGAGCAATTCTTGAACAGTCTTATACCGTGGAGTATGTTCAACAAGAGCATATGTGTGAATCCTGTTCTAGGGTCCAGGCTAATCCTGACCAGTGGGTGGCTGCTGTGCAACTTAGACAACACGTTTCTCATAGGCGTACTTTCTTTTATCTAGAGCAGCTAATTCTGAAGCATGGTGCTGCTGCCAGTGCTATAAGAATCAAGCAGATGGAACAAGGTATTGACTTCTTCTTCTCCAATCGAAGTCATGGAGTTAAATTTGTGGAGTTTGTAGGGAAAGTTGCTCCTGCAAGGAGCCGCAGTGATAAGCAGCTAGTTTCCCATGATCCAAAGAGTAATAACTACAACTACAAATATACATTTTCTGTAGAACTCAGCCCCATTTGCCGTGAGGATTTAATCTGTCTGCCTCCAAAAGTTGCTGTTAGTTTGGGAAATATTGGTCCTATTGTGATTTGCACCAAGGTTACCAACAGCATTGCTCTGCTTGATCCATTTACCTTGAGGCACTGTTTCTTAGATGCTGATCAATACTGGAGAACATCCTTCAAGTCATTACTTACTAGCAGACAGTTAGTGGAATATATAGTGTTGGATATGGAGGTTATTTCATCTGAGGTTACTATTGGTGGCACAAAATATCGCCTAGCAGATGCTCAAGTTGCTCGTGTGTCAGATTTTGGCAAGAACGACACAATATTTAACATCAAGACTCATCTGGGTCATCTTTTAAATCCTGGTGATTATGCTCTTGGTTATGATCTGTATGGGGCTAATAGTAATGACATGGAGCTGGACAAGTACAAAGGGCACATTCCTGAAGCAATTTTAATAAAGAAGAGTTATGAAGAGAAGCGCCAAAAGAAACGGGGGAAGCCTCGATCATGGAAGCTGAAGTCACTTGAAATGGAGGTTGATGATAGGAAACTTGATCAAGACAAAATGGTCTCAGAATATGAACAATTCTTGAAAGATTTGGAAGAAAACCCTGATATGAGGTTCAACATATCATTGTACCGAAACAAGGAGTACCAGCCATCAGAGATGGCATCGGTGACTGATGGTGATGAGCTACCTTCTGTTCCATTGGAGGAATTACTGGCTGATCTTGATCTGAGTGGAGATGAAGATGAAGAAGACGACATGACAGAATGA 1890 0.4169 MGRVLFFSKGTERERETKNREKRKRLGATDASSLLNYHYALCLNKILQIILKGFTNNVKTNTWLFIIMDYSFHLVFLRRCLHPHLEFQQRLLIYLSTSLCPLLRREYYLQFISMFSSSGMADGSGMFKVHQTIGSVLCCKCGIPMQPNAANMCVKCLSSEVDITEGLLKRLVLVHCPECESYLQPPRTWVKLQLESKELLTFCLKKLQKNLNSSKVRLVHAEFIWTEPHSRRVKVKVKVQKEVINGAILEQSYTVEYVQQEHMCESCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLILKHGAAASAIRIKQMEQGIDFFFSNRSHGVKFVEFVGKVAPARSRSDKQLVSHDPKSNNYNYKYTFSVELSPICREDLICLPPKVAVSLGNIGPIVICTKVTNSIALLDPFTLRHCFLDADQYWRTSFKSLLTSRQLVEYIVLDMEVISSEVTIGGTKYRLADAQVARVSDFGKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDMELDKYKGHIPEAILIKKSYEEKRQKKRGKPRSWKLKSLEMEVDDRKLDQDKMVSEYEQFLKDLEENPDMRFNISLYRNKEYQPSEMASVTDGDELPSVPLEELLADLDLSGDEDEEDDMTE 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00371 629 Pfam NMD3 family 138 370 IPR007064 -
Phco1g00371 629 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 130 619 IPR039768 GO:0043023
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00371 Phco-Chr1 2865734 2868918 Dispersed