Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00368 ATGGTTAAGATTTGTTTTGTGTTGTATGAGAAACCAAGCAAGTGCATTATTCTCAATAAGTTCATCTGCTTTGTGCCCCACACCCTTCAACGCGATTCTTATTCTGATCGCAGATTAGTGGAACAAGGGCTGTGGGTGAGGATGAATTTGGAACAAATTGGGCAGCCTAAATCATCTAATGGATACATCCGTCGAAAATCTGAGAAAGAGGGGGCAACTAAGTCTGATTACAAGATCCCCTCTGGAAAGTCAAATGCCAGCAGCAGATTAGCGAGTACAGGTGTAGTGACTGACAATAAAGGTGGTAGTTATGGGAGTCCTTCACATGATCGACTAGTATATTTAACATCATGCCTTATTGGGCAGCATGTGGAAGCCCAGGTGAAAAACGGATCTATATACTCTGGAATATTTCATGCAACAAATACCGACAAAGATTATGGAATCATTTTGAAAATGGCTTGTCTGACAAAGGATGGCTCCTTGCAAGGACAGAGATTTCGTGTAGAATCTTTCAGCAAAGCTCCTTCTAAGACTTTAATTATACCTTCCAATGACCTTGTACAAGTTATAGCAAAGGATGTTTCTGTTTTCAGAGATGACCAAACTAGTGAGCCTCATTCTGATGACATGCATCATGAGATCATGGTTGATTCAGTAATATCTCAATCTCGACATGTTGAGACAGGCAGAGAATTACAGCGATGGGTACCTGATGAAAACGATCCAGAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACGAACAAAATGTTATTCGGTGTAAAAAGCACATTCAATGAGGAGTTATATACAACAAAGCTTGAAAAAGGACCCCAGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATTGCAAGAGAAATTGAGGGTGAGGAAACCCAAGATCTCCATCTGGCAGAGGAAAGAGGCCTTTACCATAACTTTGATATTGATGAAGAAACCAGATTCTCTTCAGTCTATAGGGGTAACATTGTTGGTGATAGTGGATATGACGAAAATGAGGATAAGTTGTTGGATTCGGATTCACACAATTCTGAAAGGTTTGATAATATTTATGGTTTAGTCAACAAGAGACCAGGTGAAATAAGTGGCCAGAAAGGCAATAATGGAGCTCAAAAATTGGCAAATTTCTCCTCTGTGGATCAGTCCGAGTTATCCCAGTCAAGAAGTGGTATGGATTTATGTCGTTCTGGTTCTAATGATCATGCTAAGCAGTTAGCATCTGAACATCCTGCCCAGAGTTGCTCATTTTCAGATGGTGAAAGCAGGATTCAGGAGAACTCAGCTAATAACCTACATGGAGACAATCATAATACTGTGGAAGAAAATTGGATACCAGCTGAGGATGTCCAACTGTCAAAATCTCAGGATTTACGGTCATCACTGGAGTATAAGAAAGATGGTTCTGATGAAGGGGGGTTATCTTCTAATCATATTTTATTGAAGACTCCTGAAGAAAATGTGTCGGTTGGGGAAACAAAGTCTGTAATTGCACGTGGAAGACTAGGTAGTTGTACATCAACATCTGGTCCTGGTCTATCACCAAGTTCTTCGGTTGGTTCCCTGTCTTCGGAAAAGTCAACTCTGAATCCCTATGCCAAGGAGTTCAAACTCAACCCTAATGCAAAGAGTTTTATGCCATCCCAAGCACATGCTAGGCCTCGCTCCCCGGTGTCTGATGGTTCCTTCTATTACCCAGCTACTGTATCTATCGTACCAAATATGCCACCCATGCCCATGGGTATTGGAGTTGGAACTACTTTTGCAGGGCCACAACCTGTCATGTATAATCCACAAGTGGCACAAATGCCATCCCAACCATATTTTCATCCAAATGGACCACAGTATGGACAACTTATGGGTCATCCTAGGCAAGTTTTATATGTGCCAAGTTACCAACCTGAGATGCCGTATAAGGGACGGGATTATTGA 1983 0.4155 MVKICFVLYEKPSKCIILNKFICFVPHTLQRDSYSDRRLVEQGLWVRMNLEQIGQPKSSNGYIRRKSEKEGATKSDYKIPSGKSNASSRLASTGVVTDNKGGSYGSPSHDRLVYLTSCLIGQHVEAQVKNGSIYSGIFHATNTDKDYGIILKMACLTKDGSLQGQRFRVESFSKAPSKTLIIPSNDLVQVIAKDVSVFRDDQTSEPHSDDMHHEIMVDSVISQSRHVETGRELQRWVPDENDPECPELENIFDGPWNRGWDQFETNKMLFGVKSTFNEELYTTKLEKGPQTRELEKQALRIAREIEGEETQDLHLAEERGLYHNFDIDEETRFSSVYRGNIVGDSGYDENEDKLLDSDSHNSERFDNIYGLVNKRPGEISGQKGNNGAQKLANFSSVDQSELSQSRSGMDLCRSGSNDHAKQLASEHPAQSCSFSDGESRIQENSANNLHGDNHNTVEENWIPAEDVQLSKSQDLRSSLEYKKDGSDEGGLSSNHILLKTPEENVSVGETKSVIARGRLGSCTSTSGPGLSPSSSVGSLSSEKSTLNPYAKEFKLNPNAKSFMPSQAHARPRSPVSDGSFYYPATVSIVPNMPPMPMGIGVGTTFAGPQPVMYNPQVAQMPSQPYFHPNGPQYGQLMGHPRQVLYVPSYQPEMPYKGRDY 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00368 660 MobiDBLite consensus disorder prediction 473 494 - -
Phco1g00368 660 Pfam LsmAD domain 270 338 IPR009604 -
Phco1g00368 660 MobiDBLite consensus disorder prediction 394 455 - -
Phco1g00368 660 SMART LsmAD_2 270 339 IPR009604 -
Phco1g00368 660 Pfam Ataxin 2 SM domain 109 193 IPR025852 -
Phco1g00368 660 MobiDBLite consensus disorder prediction 519 543 - -
Phco1g00368 660 PANTHER ATAXIN 2-RELATED 81 656 IPR045117 GO:0003723
Phco1g00368 660 Coils Coil 291 311 - -
Phco1g00368 660 MobiDBLite consensus disorder prediction 62 76 - -
Phco1g00368 660 MobiDBLite consensus disorder prediction 57 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00368 Phco-Chr1 2830216 2841874 Dispersed/Wgd