Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00316 ATGACGACGTCGTCTGGTTCCGTGAACAACGCCATGCCCTCAGGCCTCCAAGAAGTGCTTCTCAACCGAAAGCGCACCGAGCAACAGCAAGAAGAAGAACCGAACACCAATGCCCCACCCTCAATTTCAAGCTCGCAACTTTTTTCAGCCGCCGGTGACGCCGTTGCCGGCGACAGCTCCATCTCCAAACCCATCGTGTTGGTAACCAACAGCGACGGCATCGAGTCTCCGGGTCTAACATTCCTCGTCCAAGCTCTCGTGCGCCTCGGCCTCTACAATGTCCATGTCTGCGTTCCCCAATCGGACAAATCTGTTTCGGGCCACTCTCTCACTCTCGGAGAAACCGTGGAAGCCTCTTCTGCTCTGATTGACGGTGCCACTGCCTTTGAAGTTTCAGGAACTCCTGTCGATTGTATTTCACTAGCGTTATCTGGGGCCTTATTTTCATGGTCAAAGCCAGTGCTGGTTATTAGCGGAATTAACCGGGGATCAAGCTGTGGTCATCTCATGTTCTACTCGGGTGTTGTCGCCGGAGCAAGGGAGGCATTGTTATGTGGTGTACCTTCTTTGTCAATATCATTAAATTGGAAGAAGGATGAAAGTCAAGAGACTGATTTCAAGGATGCAGTAGAACTCTGTTTACCTTTAATAAATGCAGCTATAAGGGATGCTTTACAGGGAACTTTCCCCAAAAGCTGCTTTCTGAGTATAGAAATTCCTACATCGCCTTTAAGCAGAAAGGGCTTCAAGTTGACCAAGCAAAGTATGTGGAGATCCACTCCGAACTGGCAGGCAGTTTCAACTAGCCGCTATCCTCCTGGTCATTTCTTGGCCAGTAAACAAGGCTTTGGTCTTCAGTTTGCACAGATTGGCCGTGATGCCTCTGCCGCCGGTGCAGCTCGGAGATTAACTACTCAGAAGAAGAATTTGGAGATTGTTGAATCAATTGGAGCTGCTGGAAAATCTGATTCTAACAGGGTGAAGAAGTACTTCAGACTACAGTTTTTGGATAAACAGCAGGAAGATATAGATGATGATCTGGATTACAGAGCACTGGAAAGTGGATATGTTGCAGTTACTCCTCTCTCTCTGTCTCCTCATACTGAGACGGATATTCAAACAGCAGCTTCTTATTGGCTTTCATCTGTACTTGCTGGTGAACAATAG 1167 0.4781 MTTSSGSVNNAMPSGLQEVLLNRKRTEQQQEEEPNTNAPPSISSSQLFSAAGDAVAGDSSISKPIVLVTNSDGIESPGLTFLVQALVRLGLYNVHVCVPQSDKSVSGHSLTLGETVEASSALIDGATAFEVSGTPVDCISLALSGALFSWSKPVLVISGINRGSSCGHLMFYSGVVAGAREALLCGVPSLSISLNWKKDESQETDFKDAVELCLPLINAAIRDALQGTFPKSCFLSIEIPTSPLSRKGFKLTKQSMWRSTPNWQAVSTSRYPPGHFLASKQGFGLQFAQIGRDASAAGAARRLTTQKKNLEIVESIGAAGKSDSNRVKKYFRLQFLDKQQEDIDDDLDYRALESGYVAVTPLSLSPHTETDIQTAASYWLSSVLAGEQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00316 388 Pfam Survival protein SurE 66 258 IPR002828 GO:0016787
Phco1g00316 388 Hamap 5'/3'-nucleotidase SurE [surE]. 64 384 IPR030048 GO:0008252
Phco1g00316 388 PANTHER 5'-NUCLEOTIDASE SURE 61 385 IPR030048 GO:0008252
Phco1g00316 388 Gene3D - 55 381 IPR036523 GO:0016787
Phco1g00316 388 MobiDBLite consensus disorder prediction 1 16 - -
Phco1g00316 388 MobiDBLite consensus disorder prediction 1 44 - -
Phco1g00316 388 SUPERFAMILY SurE-like 65 379 IPR036523 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00316 Phco-Chr1 2333477 2337828 Dispersed/Wgd