Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00314 ATGACTATGTTCATCTCTACTATTTCTCTGTTGACTCTTCTTTCTGCCCTTTATGGCACTCCATCTGCTCATCCTCACACTTCATCTTCTCATTCTTATAATCAACCTTACAGAACTGCTTATCACTTCCAACCTCCCAAGAATTGGATAAATGGACCATTGCGATTTGGAGGACTTTATCATTTGTTCTATCAGTACAATCCTAAAGGTGCTGTTTGGGGAAATATTGTGTGGGCACATTCAGTGTCAAAGGATCTTGTGAACTGGACCCCACTAGAACCTGCCATCTTCCAATCTCAGCCGTCTGATATAAATGGTTGTTGGTCAGGATCAGCCACGCTGCTTCCTGGTAACAAACCAGCCATTTTATACACTGGAATTAACGAACTGAATCAACAAGTCCAAAACTTGGCCAAGCCCAAAAATTTGTCTGACCCTTTTCTTAGGGAATGGGTTAAGTCTCCCAAGAATCCTAAAATGGCACCAACTAATGCTAATAAGATCAATTCAAGTTCATTTAGGGATCCCACCACTGCATGGCTAGGGCAAGATGGACATTGGAGAGTACTTGTTGGAAGCAAAAGAGGAACGAGGGGAATGGCACTTTTGTATAGGAGCAAAGATTTTGTTGATTGGGATCAAGCCAAACACCCTTTGCATTCAATCCAAGGCAGTGGAATGTGGGAGTGCCCTGATTTTTTCCCGGTTTTGAAGAATGGCCAAATGGGTGTTGACACATCTGTGAATGGTGATCATGTTAGGCACGTGCTCAAGGCTAGTTTGGATGACCAAAAACATGATTACTACATAATAGGGAGTTACAATGCTGCCAAAGATAAGTTTATCCCAGATAAAGGGTTTGATGATTTTATTATTAGATATGATTTTGGAAAATACTATGCCTCAAAAACTTTCTTTGATGATGGAAAGAAGAGAAGGGTTTTGCTTGGGTGGGTGAACGAGTCATCAAGTGTTGCTGATGATATCAAGAAAGGATGGTCTGGAATCCATACAATTCCAAGGGCTATTTGGCTGCATAAGTCTGGTAAACAGTTGGTGCAGTGGCCAGTGGAGGAAATTGAAAAGCTAAGAGCAAAACCAGTGAATTTGCCACCCCAAGACTTAAAAGGAGGCAACTTGCTTCAAATTAATGGTGTCACAGCAACACAGGCTGATGTTGAAATTTCATTTGAAGTGAGTGAATTGAGAAAGGCTGAAATATTGAAGTATTGGATTGACCCCCAAATCCTGTGTAGCACAAAGGGTTCATCCCTCAGAAGTGGATTGGGTCCTTTTGGTTTGCTGGTTTTTGCTTCAGAGGGATTGCAAGAGTTCACATCAGTTTTCTTCAGAATATTCAGATACAAACACAGATATTTGGTGTTCTTGTGCAGTGACCAGAGCAGGTCTTCTTTAAATAAGAACAATGATTTGACCACTTATGGAACTTTTGTTGACGTGGATCCTCTTAAGGAGAAGCTGTCATTGAGAACCTTGATTGATCATTCTGTCGTAGAGAGTTTTGGAGGAGAGGGAAGGGCTTGTATCACAGCCAGAGTTTACCCAACATTGGCGATCAATGATAAAGCACAACTTTATGCTTTCAATAATGGTACATCTGATGTCAATATTACAAGACTAAGTGCTTGGAGCATGAAGAAAGCACAAATAAATTGA 1677 0.4091 MTMFISTISLLTLLSALYGTPSAHPHTSSSHSYNQPYRTAYHFQPPKNWINGPLRFGGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLEPAIFQSQPSDINGCWSGSATLLPGNKPAILYTGINELNQQVQNLAKPKNLSDPFLREWVKSPKNPKMAPTNANKINSSSFRDPTTAWLGQDGHWRVLVGSKRGTRGMALLYRSKDFVDWDQAKHPLHSIQGSGMWECPDFFPVLKNGQMGVDTSVNGDHVRHVLKASLDDQKHDYYIIGSYNAAKDKFIPDKGFDDFIIRYDFGKYYASKTFFDDGKKRRVLLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVEEIEKLRAKPVNLPPQDLKGGNLLQINGVTATQADVEISFEVSELRKAEILKYWIDPQILCSTKGSSLRSGLGPFGLLVFASEGLQEFTSVFFRIFRYKHRYLVFLCSDQSRSSLNKNNDLTTYGTFVDVDPLKEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAINDKAQLYAFNNGTSDVNITRLSAWSMKKAQIN 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00314 558 CDD GH32_Fruct1-like 48 345 - -
Phco1g00314 558 SMART glyco_32 42 512 IPR001362 GO:0004553|GO:0005975
Phco1g00314 558 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 368 552 - -
Phco1g00314 558 Pfam Glycosyl hydrolases family 32 N-terminal domain 42 356 IPR013148 -
Phco1g00314 558 Gene3D Glycosyl hydrolase domain; family 43 46 366 IPR023296 -
Phco1g00314 558 Pfam Glycosyl hydrolases family 32 C terminal 359 551 IPR013189 -
Phco1g00314 558 SUPERFAMILY Arabinanase/levansucrase/invertase 32 357 IPR023296 -
Phco1g00314 558 SUPERFAMILY Concanavalin A-like lectins/glucanases 356 554 IPR013320 -
Phco1g00314 558 Gene3D - 367 552 - -
Phco1g00314 558 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 29 557 - -
Phco1g00314 558 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 46 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00314 Phco-Chr1 2316881 2327072 Dispersed/Wgd