Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00313 ATGATAGGAAGCTTCAACCAGACTGATTCAATTGAGTGCTGTGAAGCTGCAATGCAGAAAGCTTATTCTCAGGAATCTGGTCCTGCACTGAAGAAGTCAAAAACCAAAATTTTGGCTTCTCAAAATGTAGATTATTGTGAAATGGCAGAAAGTGAGGACAGACTTAGTGACATGCCAGATTGTCTTATTCATCACATCTTGTCATTTCTGGAAACAAAGGATGCTATTCAAACTTCTGTTTTATCAAAGAGGTGGAGGTATCTTTGGGTTTCAGTTCCCTGCCTGAATTTCAGTAGCAAATCATTCACTCGGTTGGTTGACTTCAAGAAGTTTGTGCTGTGGGTCCTAAACCACCGTGATTCTTCTCATGTCAAACTTCTTGTTTACTATCGCTTTGGGGTAGATTATGCCACAGATCAACATCTTTTGAATAAGGTTATTGAGTATGCAGCATCACATGGGGTTGAAGAAATCAAAATCAATCTCCGTGCAAAAACATCCGGTAGTCCTCCTGTTGAAATTCCTTTGTCTCTATTTTCTTGCCAATCTTTGAAAAAGCTTGAGTTAAAAGATTGCCATCCTACGAATGTGTCATCCCCTATAGGTTGCAAATCATTGGACTTGTTGCATCTGGAACAGTTTGCAATGGATCCTGCTGCTGCTGACTTTTCAAATCCATTTGCAAGTTTGGCAGAACTATTTGGTTTCACAACGTTGACAACCCTGCATCTAAATAACTTCACTCTGTGTTATACAGGAATTGACTGTCTGGATCCATTTGCTAATTGTGTCCATATGAAGAATTTGCACTTAAGTGAAATGTCCTTTAAGTCAGATTTGAACCCTAAGGATTTTGTGATATCTGCTCCCAAACTCAGTAACTTGAATCTAATGTGCAACCGCTTCAAATGCAAGATTGTAGTTGCTGCACCACAGCTTTCCAATTTCACTTACTTGTATTCTACACCTTGTGCTTTCTTTGAGTTTCGTCTTCCATCTTTGGATGGCTTGGTCATTGATATACATGAACCACATGATCGATTTGAAAAATGTCGACGAAGGAAAAGAGAGGAGACTCTACATGGTTTGATCAATATGTTACGGGGATGTCATAGTGCAGAAGCTATTAAACTATCTTTCTGTACAGCTGCGGTTACTTGTGGAACTGCAGCTCTGTTAAAGCCAGAATGTTTGCCTCCTAGTAAATTGAAGTCATTGAACTTTGGAGTGGGATCAACATATAAAATCTTCATCAATAACCTTGACCATATAACTGCCTACTTCCGCAATTGTTCTCAGCATGCAGACTTTGAGATTGTGGCTGTTTAG 1329 0.3935 MIGSFNQTDSIECCEAAMQKAYSQESGPALKKSKTKILASQNVDYCEMAESEDRLSDMPDCLIHHILSFLETKDAIQTSVLSKRWRYLWVSVPCLNFSSKSFTRLVDFKKFVLWVLNHRDSSHVKLLVYYRFGVDYATDQHLLNKVIEYAASHGVEEIKINLRAKTSGSPPVEIPLSLFSCQSLKKLELKDCHPTNVSSPIGCKSLDLLHLEQFAMDPAAADFSNPFASLAELFGFTTLTTLHLNNFTLCYTGIDCLDPFANCVHMKNLHLSEMSFKSDLNPKDFVISAPKLSNLNLMCNRFKCKIVVAAPQLSNFTYLYSTPCAFFEFRLPSLDGLVIDIHEPHDRFEKCRRRKREETLHGLINMLRGCHSAEAIKLSFCTAAVTCGTAALLKPECLPPSKLKSLNFGVGSTYKIFINNLDHITAYFRNCSQHADFEIVAV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00313 442 SUPERFAMILY L domain-like 174 325 - -
Phco1g00313 442 PANTHER OS11G0201299 PROTEIN 50 408 - -
Phco1g00313 442 Gene3D Ribonuclease Inhibitor 142 337 IPR032675 -
Phco1g00313 442 Pfam F-box domain 55 91 IPR001810 GO:0005515
Phco1g00313 442 CDD F-box_AtFBL13-like 55 89 - -
Phco1g00313 442 ProSiteProfiles F-box domain profile. 52 105 IPR001810 GO:0005515
Phco1g00313 442 SMART fbox_2 58 98 IPR001810 GO:0005515
Phco1g00313 442 Gene3D - 39 95 - -
Phco1g00313 442 SUPERFAMILY F-box domain 45 103 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00313 Phco-Chr1 2307385 2308799 Dispersed