Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00301 ATGGCTTCAGTTGGTGCACTCAGATTCTTGTTGTGCCTTGCTCTATGCCTCTGCAACTTTCTACCTTCTTGTCAAGGTAGTAGTAGTAGTCACTGGCATGAAAATAAATACCCTTTTATCAGAAATGCAAGCTCCTTCTCATCACCATCAATTTCAACTACCACCTCCAATAATGTCTATGACTACATAATATTGGGAGGTGGCACAGCAGGGTGTCCTTTGGCTGCAACTCTCTCTCAGAATTATAGTGTTCTGGTGCTTGAAAGAGGGGGTGTTCCCTTCACCAACCCCAATGTTTCATTTCTTGAGAACTTCCACATTACCTTGGCAGACATTTCACCAACTTCAGCTTCTCAATACTTCATTTCAACTGATGGAGTCTACAATTCAAGGGCCAGGGTCCTAGGAGGTGGGAGTTCTATCAATGCTGGTTTCTACACTAGAGCAAATCCAAGTTTTATTGAGAAGGTGGGATGGGATGCCAAGCTAGTAAATCAGTCATATCCATGGGTTGAAAACCAAATTGTTCACCGTCCAAAGTTTTCACCTTATCAAAGAGCAGTGAGGGATAGTCTTCTAGACTCTGGTGTCTCACCTTTTAATGGCTTCACCTATGATCATCTCTACGGAACAAAAGTTGGTGGAACCATTTTTGACAGATTTGGCCGCCGTCACACGGCTGCTGAACTGCTTGCTTCAGGCAACCATGAAAAGCTTACTGTTTTGGTCTACGCCACTGTTCAAAAGATTGTGTTTGATACAAAAGGAAAGAAACCAAAAGCTGTAGGGGTTATTTTCCAAGATAAAAATGGGAGACAGCATGAAGCTATTCTGGCAAATGATAGGCATAGTGAAGTGATAATGTCTACTGGGGCAATTGGGACTCCTCAGTTGCTAATGCTTAGTGGAATTGGACCAAAAGAAGAACTCCAGAAGTTGAACATCCCAGTGGTCCTTGACAACCAGTTTGTTGGGAAAGGAATGGTAGACAATCCCATGAACACAATGTTTGTTCCTTCTAAAAGACCAGTTCATCAGTCACTCATAGAAACTGTTGGGATCACCAGGATGGGTGTGTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCTAATGATAGCATTCATTGCCACCATGGTATCATGTCAGCCGAGATTGGGCAGTTGTCTACAATCCCTCCTAAGCAAAGATCACCAGAAGCTGTTCAAGAATTTATCAAGAACAAAAGAGACCTACCGATTGAAGCATTTAAGGGAGGCTTTATTTTGTCAAAAGTTGCCAATCCTTGGTCAGTTGGTGAGCTCAAGCTGGTCAACACCAATGTGAATGACAACCCAGCTGTTACCTTCAACTACTTCAGTCATCCATACGATCTTAAGCGCTGCGTTGAGGGGATCCGTTTGGCCATTAAGGTTGTCCAGTCAAAACATTTCACAAACTACACTTTGTGTGACAAAAAAACCGCAGAGGAACTGCTCAACCTCACTGTGAAGGCTAATGTCAACTTCATACCCAAGAATGTAAAAGACACAAAGTCACTAAAGCAGTTCTGCAAAGACACTGTGATCACAATTTGGCACTACCATGGAGGGTGCCATGTGGGGAAGGTAGTCAACCCTGAATACATGGTCCTTGGTGTTGACAGACTCCGTGTGGTAGATGGCTCAACATTTGATGAATCACCAGGAACAAATCCTCAAGCCACTGTTATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGACAGGTTGGGGAAATTGGCAGGTATATGA 1776 0.4347 MASVGALRFLLCLALCLCNFLPSCQGSSSSHWHENKYPFIRNASSFSSPSISTTTSNNVYDYIILGGGTAGCPLAATLSQNYSVLVLERGGVPFTNPNVSFLENFHITLADISPTSASQYFISTDGVYNSRARVLGGGSSINAGFYTRANPSFIEKVGWDAKLVNQSYPWVENQIVHRPKFSPYQRAVRDSLLDSGVSPFNGFTYDHLYGTKVGGTIFDRFGRRHTAAELLASGNHEKLTVLVYATVQKIVFDTKGKKPKAVGVIFQDKNGRQHEAILANDRHSEVIMSTGAIGTPQLLMLSGIGPKEELQKLNIPVVLDNQFVGKGMVDNPMNTMFVPSKRPVHQSLIETVGITRMGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKQRSPEAVQEFIKNKRDLPIEAFKGGFILSKVANPWSVGELKLVNTNVNDNPAVTFNYFSHPYDLKRCVEGIRLAIKVVQSKHFTNYTLCDKKTAEELLNLTVKANVNFIPKNVKDTKSLKQFCKDTVITIWHYHGGCHVGKVVNPEYMVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00301 591 Pfam GMC oxidoreductase 60 332 IPR000172 GO:0016614|GO:0050660
Phco1g00301 591 Pfam GMC oxidoreductase 428 574 IPR007867 GO:0016614
Phco1g00301 591 ProSitePatterns GMC oxidoreductases signature 2. 291 305 IPR000172 GO:0016614|GO:0050660
Phco1g00301 591 PIRSF Alcohol_oxidase 40 590 IPR012132 GO:0050660
Phco1g00301 591 PANTHER OSJNBA0019K04.7 PROTEIN 20 585 - -
Phco1g00301 591 ProSitePatterns GMC oxidoreductases signature 1. 132 155 IPR000172 GO:0016614|GO:0050660
Phco1g00301 591 SUPERFAMILY FAD/NAD(P)-binding domain 52 583 IPR036188 -
Phco1g00301 591 Gene3D - 177 523 - -
Phco1g00301 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 530 - -
Phco1g00301 591 Gene3D - 60 573 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00301 Phco-Chr1 2225781 2231758 Transposed