Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00276 ATGTTGTTGCCAATAAGTGGAGTAATAGGGATGAATTCTTCAATGGATGATATGACTTTGATTCAGCAAAGCCAGCGACATCACTTGGTTGTGAGAGAGCTTGGTGAGGAGATTGATTTGGAAATTGGACCTGGGGAGGATGACCCTTCATTTGGTAATGCTGCTCTAATTGGTGCACCAATGCGGGAATCCTCTGCAGAAGAACATGGTGAGAGCAAGCAGATGGTGATGGTTTCTCAAATTCGTAATGATTCTCAAGATATGTCCAAGAACCAACAGGTGAAAAGGAAGAAAAAGGTTGTCAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAATGGGCTTATGTTGATGTGAAGGAAGGGACACCTAGGATTTTCTGCTCTGTCTGCAGGGAGTATGGCCGGAAGCATAGAAGAAATCCTTATGGGAATGAGGGTAGCCGAAACATGCAGATGAGTGCCCTGGAAGAACACAATAATAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTTGACAAGCCTATTTATGTAAAAGTTGCCATGTCAAAAACGGCTGGATCAATTCTTGAAGCTACTCTGAAAAGGGACCCTCATGAGGTTGAATTTATTCAGGCAGTACAGGAGGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAGAACTCTCGTTATGTTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTATTTTTAGGGTTTCATGGGTGGATGATAGGGGTGTGACACATGTAAATCGGGGCTTCAGGGTACAATATAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCACCCATCAATGAATTTAAGTGTTGCTAAGTTCCTTGGTTTTGAACAGACGTTAAAGAATGCCTTATCACCATACAAATTGGGAGGAGCAGCTGGTGGGAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGCTACCTGGGGCCTGACAAGGACCTTCCATCTGAAGAAATGGGTGTTGGTACTCGAGAAATGGGGTATCTTTTTGGACAGTATAGACGTCTAGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCAAGAATATTTTGGTCTGGTTCCAGTCTTCGACCTGAAGCTACTGGCTATGGGCTGGTTTTCTTTGCCCAGCTCATGCTTGCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGTTGTGAGTGGTTCTGGAAAGATCTCAATGCATGTTTTAGAAAAGCTAATTGCTTATGGTGCTCTTCCTATTTCAGTATCAGATTCCAGAGGATATTTGGTTGATGAGGATGGATTTGACTACATGAAAATATCATTTTTGAGAGACATCAAAGCTCAGCAAAGAAGCTTGCGAGACTATTCAAAAACCTATGCTCGGTCCAAATATTATGATGAAGCAAAGCCGTGGAATGAAAGGTGTGATGTTGCATTTGCTTGTGCTTCACAGAATGAAATTAATCAATCTGATGCCATTAATTTGGTCAATTCAGGTTGTCGTATACTAGTTGAAGGTTCAAACATGCCTTGTACCCCTGAGGCAGTTCAGATTTTGAGGAAGGCTAGTATTCTCGTTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCACCAGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAGAGAGCTATCAAAGCTGCAACTGATTTTGGTTATCAAAAGGAAAGTCCTGAGGCTCTGGTGCATGGAGCAGTCATATCTGCCTTTCTAACCATTGCTCAAGCCATGACTGATCAAGGCTCTGTATAG 1917 0.4246 MLLPISGVIGMNSSMDDMTLIQQSQRHHLVVRELGEEIDLEIGPGEDDPSFGNAALIGAPMRESSAEEHGESKQMVMVSQIRNDSQDMSKNQQVKRKKKVVKRWREEWADTYKWAYVDVKEGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPIYVKVAMSKTAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYVNIMERLLEPERMIIFRVSWVDDRGVTHVNRGFRVQYNQSMGPCRGGIRFHPSMNLSVAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKISMHVLEKLIAYGALPISVSDSRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFACASQNEINQSDAINLVNSGCRILVEGSNMPCTPEAVQILRKASILVAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGSV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00276 638 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 197 382 IPR046346 -
Phco1g00276 638 Gene3D Glutamate Dehydrogenase, chain A, domain 3 567 638 - -
Phco1g00276 638 FunFam NADP-specific glutamate dehydrogenase 568 638 - -
Phco1g00276 638 FunFam NADP-specific glutamate dehydrogenase 197 240 - -
Phco1g00276 638 Gene3D - 395 560 - -
Phco1g00276 638 FunFam Glutamate dehydrogenase 395 560 - -
Phco1g00276 638 Gene3D Leucine Dehydrogenase, chain A, domain 1 241 376 - -
Phco1g00276 638 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 389 636 IPR036291 -
Phco1g00276 638 Gene3D Glutamate Dehydrogenase, chain A, domain 3 197 240 - -
Phco1g00276 638 FunFam Glutamate dehydrogenase 241 376 - -
Phco1g00276 638 SMART ELFV_dehydrog_3 390 636 IPR006096 GO:0006520|GO:0016491
Phco1g00276 638 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 243 370 IPR006097 GO:0006520|GO:0016491
Phco1g00276 638 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 389 636 IPR006096 GO:0006520|GO:0016491
Phco1g00276 638 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 143 638 - -
Phco1g00276 638 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 421 441 IPR006095 GO:0006520|GO:0016491
Phco1g00276 638 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 300 314 IPR006095 GO:0006520|GO:0016491
Phco1g00276 638 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 379 401 IPR006095 GO:0006520|GO:0016491
Phco1g00276 638 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 558 569 IPR006095 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00276 Phco-Chr1 1985350 1994687 Tandem