Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00264 ATGGTTAAACATTTTGTGTTGTTGTGTTTGACTCTTACAGCTCTTATTCACGCCCAAGATCAATCAGGATTCATTAGCATTGATTGTGGAGTGGTGGATGAACCAAGCTACAAAGATGAAACTACTGGCATTCAATACAATTCAGATGGAAATGCCACAGACACAGGTATAAACAGGAGCATATCATCTGAATACATGGTCAAATCCTTAGAGAGAAGGTTTTGGAATGTTAGAAGCTTCCCTGAAGGCACAAGAAACTGCTATACCTTTCATCTTCCTCGAATGAATAGCAATAAACGTTTCATTAGGGCAAGGTTCATGTATGGAAACTATGATGGAAAACATTCCCTGCCCAAGTTTGATTTGTACCTTGGACCCAACTTCTGGGACTCTGTGGTGTTTGAAAATGCTTCCACTGTGACAACCATGGAAATTGTCCACGTTGCAACATCAGATTATATTCAAATTTGCCTTGTTAACACAAATGAAGGGACACCCTTCATATCAACAGTGGAGATCAGAGTTCTAAATGATGGTACCTATGTATCTGAGTCAATACAGCTTCTGGAAAGGTTTGATGTAGGCTTACAAGAGGGTCAAATTGTCAGGTACCCCGATGATATTTATGATCGAATTTGGTCACCCTACAATCCACATGGCTGGAAACAGATTAGTACAACTCTTGCCGTAGCTAATGGAGGACCTTTCTCTTATGGGGTACCCTCCACTGTCCTTAAAACAGCAGCAACACCAGAAAATGCGAGTGATAATTTGAGATTTTCATATCAGCTAAGCAATGGTGCGGTCAGATTTTATGTATACATGTACTTTGCTGAGATAGAGAAGCTTGTAGCTGATCAAACTAGAGAATTCGATGTTTATGTGAATGGGGCACTCCTTCAGAATAATGCCAGTTTACCTTTCCTGGGTCACGGTACTTTGATATATATATCCTCTGAACCTGAAACCGTGTTACAAATTTGGATCAACAGAACAAATAAAGCAACTATGACCCCTATACTGAATGGCATTGAGCTTTATGAAGGGAAGACCCTAAATCTACCAGAAACAGATCAAAATGATGTTGGTGCCATCATGCAAATAAAGTCAACGTACAACATCAAGCAAATATGGCAAGGAGATCCTTGTAGCCCTAAAACTGACATGTGGAAGGGTGTGAACTGCAGCTACAATGGACACAACCAACCTAGAATCACATCTTTGAACCTGTCCTCTAGTGGGTTGAATGGAAACATAGCTCTGGCCATATCAAATCTGAAGTTAATACAATATTTAAATATAGGAGGTAATAAACTATCAGGCTCAATTCCTTCAAAACTCTCTGAGAGAACAAGAAATGGGTCGCTGTTTATATTAAGTGTTGGTGGAAATCCACATCTTTGCTTCTCAAGTCCTTGTCACACCAGGAATAAGATAGTAATTCCATTGGTAGTAACAGCTGTTGCAGCTCTCATCCTTTCAGCAGCACTCTCCTTTATTTATAGAAGAAGACTTCAAGTTGTCGTGAATAGGCACAAGCTGAGTTGTTTCAACAAAACTGTGAGTGTGGATTCAAAGAAACAAGAGTTCACCTACTCAGAGGTTCGAAGTATTACCAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAACTGTCTACCATGGTTGCATAGGTGAAACACAAGTAGCAGTGAAGATGCTCACTGCTTCAACTCAAGGGTATCAGCAATTTCAGACAGAGGCAAATATTCTCACAAGAGTACACCATAAATGCTTGACTCCACTTATTGGATATTGCAATGAAGGCAATAGAACAGCACTCATCTATGAATACATGACCAATGGAGACTTATCTGACAAACTATCTGGTGAAAGTCAAACGTTCTTAGATTGGAATCAGAGACTTCAAATTGCACTAGATGCTGCAGTAGGTTTGGAGTACCTTCATAATGGTTGCAAGCCCCCAATTGTTCACAGAGATGTTAAGACTAGAAACATTTTACTGAATGAAAATCTACGTGCTAAAATATCTGATTTTGGATTGTCAAGGATCTTTTCAGATGAAGGTGACACCCATGTATCAACAGTTATTGCAGGCACCCCAGGATACCTTGACCCTGAATACTACATAACAAACAGGTTGAATGAAAAAAGTGACGTCTTTAGTTTTGGAGTTGTTCTCCTAGAGATAATCACAGGGCGAACAGCCATATTGAAAAGCAGTGTGAAAACTCACATTATCAAATGGGTGAGTTCCATTCTGGAAGATGATGGTGAAATTGATGGTATTATGGATCCAAGGTTACAAGGAGATTATGACAGTGAGGCTGCAAGGAAAGTAGTAGATGTAGCAATGGTTTGTGTAGCTCCAAGTTCTGTTAATAGGCCATCAATTAGTCAAGTGGCTATGGAACTAAAACTATGTTTTCCCATAGGGGAACTTAGGAGTGCGTCTAGTGGATCTATTGAAATTGCCTCCATGAATGAAATCAGTGGATTTAGTTCTTTAGCAAGGTAA 2523 0.3964 MVKHFVLLCLTLTALIHAQDQSGFISIDCGVVDEPSYKDETTGIQYNSDGNATDTGINRSISSEYMVKSLERRFWNVRSFPEGTRNCYTFHLPRMNSNKRFIRARFMYGNYDGKHSLPKFDLYLGPNFWDSVVFENASTVTTMEIVHVATSDYIQICLVNTNEGTPFISTVEIRVLNDGTYVSESIQLLERFDVGLQEGQIVRYPDDIYDRIWSPYNPHGWKQISTTLAVANGGPFSYGVPSTVLKTAATPENASDNLRFSYQLSNGAVRFYVYMYFAEIEKLVADQTREFDVYVNGALLQNNASLPFLGHGTLIYISSEPETVLQIWINRTNKATMTPILNGIELYEGKTLNLPETDQNDVGAIMQIKSTYNIKQIWQGDPCSPKTDMWKGVNCSYNGHNQPRITSLNLSSSGLNGNIALAISNLKLIQYLNIGGNKLSGSIPSKLSERTRNGSLFILSVGGNPHLCFSSPCHTRNKIVIPLVVTAVAALILSAALSFIYRRRLQVVVNRHKLSCFNKTVSVDSKKQEFTYSEVRSITNNFERVVGKGGFGTVYHGCIGETQVAVKMLTASTQGYQQFQTEANILTRVHHKCLTPLIGYCNEGNRTALIYEYMTNGDLSDKLSGESQTFLDWNQRLQIALDAAVGLEYLHNGCKPPIVHRDVKTRNILLNENLRAKISDFGLSRIFSDEGDTHVSTVIAGTPGYLDPEYYITNRLNEKSDVFSFGVVLLEIITGRTAILKSSVKTHIIKWVSSILEDDGEIDGIMDPRLQGDYDSEAARKVVDVAMVCVAPSSVNRPSISQVAMELKLCFPIGELRSASSGSIEIASMNEISGFSSLAR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00264 840 Gene3D Phosphorylase Kinase; domain 1 521 613 - -
Phco1g00264 840 Gene3D - 191 351 - -
Phco1g00264 840 Gene3D Ribonuclease Inhibitor 363 477 IPR032675 -
Phco1g00264 840 SUPERFAMILY L domain-like 371 469 - -
Phco1g00264 840 Pfam Malectin-like domain 27 348 IPR024788 -
Phco1g00264 840 SUPERFAMILY Protein kinase-like (PK-like) 524 807 IPR011009 -
Phco1g00264 840 SMART serkin_6 540 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00264 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Phco1g00264 840 ProSitePatterns Protein kinases ATP-binding region signature. 546 567 IPR017441 GO:0005524
Phco1g00264 840 CDD STKc_IRAK 546 808 - -
Phco1g00264 840 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 614 818 - -
Phco1g00264 840 ProSiteProfiles Protein kinase domain profile. 540 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco1g00264 840 Pfam Protein tyrosine and serine/threonine kinase 542 804 IPR001245 GO:0004672|GO:0006468
Phco1g00264 840 Gene3D Transferase(Phosphotransferase) domain 1 614 812 - -
Phco1g00264 840 PANTHER OS07G0107800 PROTEIN-RELATED 25 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00264 Phco-Chr1 1891760 1899542 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phco1g00264 Malectin_like 4.5e-102 CL0202