Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco1g00262 | ATGCGAAACATTGAAGTTCGTCGATTTTGCACTCTGATAAACGAAGCAACCCACAGAAACTTGCTTCCCATACCTCACCGAAGCCTTCCCGAACCTCGAGGCCAGGATCTGGACTTCATCACTGTCGCTCACAGTCACGTCATCAACTCCCATTGGGAAAAGCTTCACCCTTTGTGCCCCCTTCTCACGCCCTTCCGTCTCAAACACCTCCTCCTCAACCTCCAAAACGACCACGTTTTGTCCCTCAAACTCTCCCAATGGCTTCTCCGACACCACCCATCAACGCACACCCTCGAAACCCTCTCCTTACTCCTCCACACCCTCGCCAAACATCGCCAATTCAAAACCATCCAAACCATCCTCACAAAAATCCTCTCTTCACACCCTCCCCACACCCTCTTCCACTCCCTCTTACACTCCTACCCTCTCTGCAATGCTTCCCCTCTCGTCTTCGACGCCCTCTTTAAAACCCTCGCCCACACCAGTAAATTCCGCAGCGCCACCCTCATTTATACCCTAATGAAGCAATACGGCTTCTCCCTCACTGTTGAATCCTGCAACGCCTTTTTAAGTTCTCTGCTTCGCCTCCGCAGAGCTGATATTGCTTTATCGTTTTATCGGGAGATGCGTCGCTCTTACCTTTCGCCTAATGTCTACACTCTCAACATGGTTGTTCGTGCTCATTGCATGCTTGGGGAAGTGCAGAAGGGCTTTGAGATTTTCCAGAAGATGGGGGACATGGGCTTGAGTCCTACTGTTGTGTCTTTCAATACTTTGATTTCGGGGTATTGTAACAAGGGGCTGTTTGGCTTGGCGTTAAAGGTTAAATCTTCGATGGGGGATAGTGGAGTGCAGGCTAATGTGGTTACTTTTAACACTCTAATTAATGGGTTTTGTAAGGAGAGGAAGTTGCATGAAGCGAATAGGGTTTTCAATGAGATGAAGGTTGCCAATGTGGCTCCCAATGTTGTGACTTACAATACTTTGTTGCATGGGTATGGTGAGGTCGGAGACAGTGAAATGGGTGGGAGGGTTTATGAGGAGATGGTGAGGAATGGGGTTAAGGCTGATATATTAACTTATAATGCGTTGATTTTGGGGCTGTGTAAGGAGGGGAAGACAAAGAAGGCTGCAGGGTTTGTAAAGGAGCTTGATAAAGAGAACTTGGTTCCCAATGCCAGTACTTTTTCTGCTCTTATTACTGGGCAGTGTGTGAGGAACAATTCTGAGCGTGCCTTTCTTGTTTATAGGAGCATGGTGAGGAGTGGTTGTAATCCAAATGAGCACACTTTTCAGATGCTGATATCTGCTTTTTGCAAGAATGAGGACTTTGATGGGGCTGTGCAGGTTTTGAGGGACATGCTGGGCAGATTGATGAGTCCAGATTCCAGCACGTTATCTGAGCTCTATCATGGACTTGGCAGGTGTGGGAAAAGCCAGTTGGCATTGTCGCTGTGTAGCGAGATGGAAGCGAGGCGGCTATTGCCGGATGGGTTTGACAAAAAATTATTAGTTACACATCCTGAAACTGAGACAAGTCGCTGA | 1545 | 0.4783 | MRNIEVRRFCTLINEATHRNLLPIPHRSLPEPRGQDLDFITVAHSHVINSHWEKLHPLCPLLTPFRLKHLLLNLQNDHVLSLKLSQWLLRHHPSTHTLETLSLLLHTLAKHRQFKTIQTILTKILSSHPPHTLFHSLLHSYPLCNASPLVFDALFKTLAHTSKFRSATLIYTLMKQYGFSLTVESCNAFLSSLLRLRRADIALSFYREMRRSYLSPNVYTLNMVVRAHCMLGEVQKGFEIFQKMGDMGLSPTVVSFNTLISGYCNKGLFGLALKVKSSMGDSGVQANVVTFNTLINGFCKERKLHEANRVFNEMKVANVAPNVVTYNTLLHGYGEVGDSEMGGRVYEEMVRNGVKADILTYNALILGLCKEGKTKKAAGFVKELDKENLVPNASTFSALITGQCVRNNSERAFLVYRSMVRSGCNPNEHTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDSSTLSELYHGLGRCGKSQLALSLCSEMEARRLLPDGFDKKLLVTHPETETSR | 514 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco1g00262 | 514 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | 65 | 408 | - | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 462 | 496 | IPR002885 | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 287 | 321 | IPR002885 | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 427 | 461 | IPR002885 | - | |
| Phco1g00262 | 514 | Gene3D | Tetratricopeptide repeat domain | 317 | 384 | IPR011990 | GO:0005515 | |
| Phco1g00262 | 514 | Gene3D | Tetratricopeptide repeat domain | 246 | 316 | IPR011990 | GO:0005515 | |
| Phco1g00262 | 514 | Gene3D | Tetratricopeptide repeat domain | 385 | 500 | IPR011990 | GO:0005515 | |
| Phco1g00262 | 514 | Gene3D | Tetratricopeptide repeat domain | 75 | 245 | IPR011990 | GO:0005515 | |
| Phco1g00262 | 514 | NCBIfam | pentatricopeptide repeat | 289 | 323 | IPR002885 | - | |
| Phco1g00262 | 514 | NCBIfam | pentatricopeptide repeat | 219 | 253 | IPR002885 | - | |
| Phco1g00262 | 514 | NCBIfam | pentatricopeptide repeat | 254 | 287 | IPR002885 | - | |
| Phco1g00262 | 514 | NCBIfam | pentatricopeptide repeat | 185 | 217 | IPR002885 | - | |
| Phco1g00262 | 514 | NCBIfam | pentatricopeptide repeat | 395 | 428 | IPR002885 | - | |
| Phco1g00262 | 514 | NCBIfam | pentatricopeptide repeat | 429 | 461 | IPR002885 | - | |
| Phco1g00262 | 514 | NCBIfam | pentatricopeptide repeat | 324 | 357 | IPR002885 | - | |
| Phco1g00262 | 514 | NCBIfam | pentatricopeptide repeat | 360 | 393 | IPR002885 | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 217 | 251 | IPR002885 | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 392 | 426 | IPR002885 | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 252 | 286 | IPR002885 | - | |
| Phco1g00262 | 514 | Pfam | PPR repeat family | 357 | 404 | IPR002885 | - | |
| Phco1g00262 | 514 | Pfam | PPR repeat family | 183 | 229 | IPR002885 | - | |
| Phco1g00262 | 514 | Pfam | PPR repeat family | 287 | 333 | IPR002885 | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 322 | 356 | IPR002885 | - | |
| Phco1g00262 | 514 | Pfam | PPR repeat | 423 | 454 | IPR002885 | - | |
| Phco1g00262 | 514 | Pfam | PPR repeat | 247 | 279 | IPR002885 | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 182 | 216 | IPR002885 | - | |
| Phco1g00262 | 514 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 357 | 391 | IPR002885 | - |