Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00212 ATGTTGGTCACAGTGATCTCAGCCCTTTCAGATTTGGAAAAATCAAAACATGATATTTCTGGCTACGTAGGAAGTGGTTCTGCTTTTGCCTGTGGTGCTCTTCAGCTTGGCTATTGTGTTCTTGCTTTGTCGTTGAAGGATGGTTTAAAGTTGCTAACATCTGTGTTGGGTCGTCCACTCTGTTTTTTATTACTTTATTTCTTGAAGCTGAACACGGATGGGAGCTCATTGGAAATTCTGATACCGCTTGGTTTATGCAATGACCAGACCCTTCTGATCTCTCTATCTCTCTCTAAACTAAACTACACTCACAGATTAGAGAGAGAAAGAAGCGGTGCATGGAAACACAGACCTCAACTAAACCAGTTTCATTATCATCGTCATCATCATCACGCAATGACTCTCCCTTCACACGATGCTTGGATTCACACTTCCCACACCCTCCTCCCCTCATGGAAATCCCTTTCCCTCTCTCATCAGTCCACCATCCCAATTTCAATATCAAGAGTTAACCAAGTCGATGCTGCACGATTGGATGTTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAAGTGTTCTCATTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCGGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGCGGTTCTCAATTTGGGTGGATAAGCCAACACCAGGCATTTCTCTCATGAACCTGAGGTACAGAGATGAGCGTGCGGTAGAACCAAGAGATAAAGTTAGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCGCAGAAAATTTGGTATTGTGTTGCCACTGTTGGTGGTCAGTATATATGGGCTCGCTTGCAATCCTTCTCTGCTTTTCGTAGATGGGGTGATACTGAGCAGAGACCATTGGCACGGCGCCTATGGATCTTGATACAACGGGTAGAAGGAGTTTATAGAGCTGCTTCATTTGGAAACCTGTTGATATTTCTTTGCACGGGAAGATATCGAAATCTTATTGAAAGAGCCTTACGAGCTAGGCTTGTATATGGGAGCCCAAATATGAATCGGGCTGTTAGCTTTGAATATATGAACCGGCAATTAGTTTGGAATGAGTTCTCGGAAATGTTACTGTTGCTTCTTCCTCTTCTTAATTCATCATCCGTGAAAAATCTCCTTCGACCTTTCTCAAAAGATAAATCATCAAGTTCATCCGATGATGGCACAGCATGTCCCATTTGCCTGGCCACTCCAACCATTCCTTTTGTTGCTCTGCCTTGTCAGCACAGATACTGTTACTACTGTCTTAGGACACGATGTGCTGCTGCTCCATCATTTAGGTGTTCCAGGTGCAGTGAGCCAGTTGTTGCTATGCAACGGCATGGTGGTGTCCCCGCAGAATGA 1386 0.4408 MLVTVISALSDLEKSKHDISGYVGSGSAFACGALQLGYCVLALSLKDGLKLLTSVLGRPLCFLLLYFLKLNTDGSSLEILIPLGLCNDQTLLISLSLSKLNYTHRLERERSGAWKHRPQLNQFHYHRHHHHAMTLPSHDAWIHTSHTLLPSWKSLSLSHQSTIPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGISLMNLRYRDERAVEPRDKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRVEGVYRAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSSSSDDGTACPICLATPTIPFVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRHGGVPAE 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00212 461 Pfam Pex2 / Pex12 amino terminal region 179 383 IPR006845 -
Phco1g00212 461 ProSiteProfiles Zinc finger RING-type profile. 405 446 IPR001841 -
Phco1g00212 461 SMART ring_2 405 445 IPR001841 -
Phco1g00212 461 Pfam Zinc finger, C3HC4 type (RING finger) 405 445 IPR018957 GO:0046872
Phco1g00212 461 ProSitePatterns Zinc finger RING-type signature. 421 430 IPR017907 -
Phco1g00212 461 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 385 457 IPR013083 -
Phco1g00212 461 CDD RING-HC_PEX2 403 449 IPR045859 -
Phco1g00212 461 PANTHER PEROXISOME BIOGENESIS FACTOR 2 131 458 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Phco1g00212 461 SUPERFAMILY RING/U-box 400 451 - -