Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00205 ATGGGGTGCAGAACCACGTTCCCTCGTTTCGTGTTGTTGCTCCGTGCCCGCTGCTGCAAAGTGCAAAACCTGAGAGAGAGAGAAATGGAGAAGATGAAAATAGAAGAGGTTCAGTCAACAACCAAGAAACAGCGTGTTGCTACCCATACTCACATTAAAGGCCTAGGTCTCGAGGCTAGTGGAAAGGCATCGCGTTTTGCCGCTGGCTTCGTTGGCCAAGTTGAAGCCAGAGAAGCATCCGGTCTCGTGGTCGACATGATTCGCCAGAAGAAGATGGCCGGCCGTGCACTCCTTCTCGCCGGACCACCTGGAACCGGAAAGACTGCACTGGCACTTGGAATAAGCCAAGAGCTTGGCACCAAGGTTCCATTCTGTCCAATGGTTGGCTCTGAAGTGTACTCCTCAGAAGTGAAGAAGACTGAGGTTCTCATGGAAAATTTTCGACGGGCCATTGGTCTGCGTATAAAGGAAAACAAGGAAGTGTATGAAGGAGAGGTAACTGAGCTCACTCCGGAAGAAACTGAGAGTGTATCAGGTGGTTATGGTAAAAGTATTAGCCATGTGATAATTGGATTGAAGACAGTGAAAGGGACCAAGCAACTCAAGTTGGATCCCACCATATATGATGCCTTGATTAAGGAAAAGGTAGCTGTTGGGGATGTTATATACATTGAGGCAAATAGTGGCGCTGTAAAAAGGGTGGGTCGAAGTGATGCTTTTGCTACAGAATTTGACCTTGAAGCAGAAGAGTATGTTCCACTTCCCAAGGGAGAGGTTCACAAGAAAAAGGAGATTGTTCAGGATGTAACCTTACATGATCTGGATGCTGCCAATGCACGACCTCAAGGGGGACAAGATATTCTGTCTCTTATGGGTCAGATGATGAAACCCAGGAAAACAGAAATCACTGACAAGTTGAGACAAGAAATTAACAAGGTTGTCAATAGATATATTGATGAAGGTGTGGCAGAGCTTGTCCCTGGAGTTTTATTTATCGATGAGGTTCATATGTTAGACATGGAGTGTTTTTCATATTTGAATCGTGCTTTAGAGAGCTCCCTCTCTCCAATAGTAATCTTTGCTACTAATAGAGGAATATGCAATGTAAGAGGGACTGATATGACCAGTCCTCACGGCATACCTGTTGACCTGCTGGATCGGTTGGTGATCATTCGAACACAAATCTATGGTCCTGCTGAAATGATACAGATTCTAGCTATCCGTGCTCAAGTAGAGGAACTGGTGGTGGATGACGAGAGTTTAGCTTTCCTTGGGGAGATTGGACAACGGACATCTTTAAGGCATGCAGTTCAGCTGTTATCACCTGCCAGCATTGTTGCAAAAATGAATGGCCGAGACAATATATGCAAGGCGGATCTTGAAGAGGTTTGTTCGCTATATTTGGATGCCAAATCATCTGCCAGGTTACTTCAAGAGCAGCAGGAGAAATACATTTCATAG 1461 0.4545 MGCRTTFPRFVLLLRARCCKVQNLREREMEKMKIEEVQSTTKKQRVATHTHIKGLGLEASGKASRFAAGFVGQVEAREASGLVVDMIRQKKMAGRALLLAGPPGTGKTALALGISQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELTPEETESVSGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQDVTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPGVLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMTSPHGIPVDLLDRLVIIRTQIYGPAEMIQILAIRAQVEELVVDDESLAFLGEIGQRTSLRHAVQLLSPASIVAKMNGRDNICKADLEEVCSLYLDAKSSARLLQEQQEKYIS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00205 486 Gene3D - 396 486 - -
Phco1g00205 486 Pfam TIP49 P-loop domain 45 396 IPR010339 GO:0005524
Phco1g00205 486 PANTHER RUVB-RELATED REPTIN AND PONTIN 29 486 IPR027238 GO:0008094
Phco1g00205 486 Gene3D - 150 275 IPR042487 -
Phco1g00205 486 SMART AAA_5 93 400 IPR003593 GO:0016887
Phco1g00205 486 FunFam RuvB-like helicase 397 486 - -
Phco1g00205 486 Pfam TIP49 AAA-lid domain 404 469 IPR041048 -
Phco1g00205 486 Gene3D - 41 393 IPR027417 -
Phco1g00205 486 FunFam RuvB-like helicase 150 275 - -
Phco1g00205 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 467 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00205 Phco-Chr1 1443728 1447033 Dispersed