Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00201 ATGCTCATTTGCATCGATCTCTCTGCATTTCTAACGCCATTCCAAATTCTTCATCTCGCACCACCGAGAAGGTACTCTCTGGCGAATTTTGGAGAAGTTATCTATCGTTTTGCCATGCGGGGAAGGCAGCGGGTAGCATCCAAGGATCACATACTTGGCCAGGATAAAGATGAAAATTTAGCTTCAGTGCGTATACAGAATGCCAAACCATGTTGGTGGCGCTCTTTTCGGCATGTACTAGTGGCTTCGCTTTCTTCCTTCTTGTATGGATACCATATTGGAGTAGTTAATGAAACATTAGAGAGCATTTCTGTAGATCTTGGATTTAGTGGGAATACAATGGCAGAAGGTCTTGTAGTAAGTGTATGTTTAGGAGGTGCTTTTATTGGATCTCTGTTCAGTGGATGGATGGCAGATGGTGTTGGGCGTAAAAGAAGTTTCCAGTTGTGTGCTTTACCTATGATAATTGGGGCTGGGATGAGTGCAACGGCAAAAACTCTGTGGGGCATGCTTCTGGGAAGGTTATTTGTTGGTACTGGAATGGGACTTGGCCCACCTGTTGCAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTTCGAGGTGCTTTTGGAGCCTTAACCCAAATTGCAACATGTCTCGGCCTCATGGGCTCTTTCTTTATCGGAATCCCAGCAAAGGAAATAGTTGGTTGGTGGCGAATTTGTTTCTGGGTATCTATCGTTCCTGCTGCAATGCTTGCCCTTTTTATGGAGATCTGTGCAGAGAGTCCTCATTGGCTTTTCAAGATAGGAAGAACCACTGAAGCTGAAGCTGAATTTGAGAAGCTCTTGGGAGGAGTACATGTGAAACCTGCAATGACTGAACTGTCAAAGTCTGACAGAGGTGATGCATCTGATACAGTAACACTTTCAGATTTGATCTGTGGCCGCCATTTCAGAGTGATGTTCATTGGATCTACGCTTTTTGCGTTGCAGCAGCTATCTGGCATAAATGCTGTGTTTTATTTCTCCTCCACTGTCTTTGAAAGTTTTGGTGTACCATCTGATATTGCAAACACATGTGTAGGAGTCTGCAATTTACTGGGGTCTGTTATTGCAATGATTCTGATGGATAAACTAGGAAGGAAATCGCTTCTCATGGGTAGCTTTCTGGGCATGGCCTTAACAATGGGTCTACAAGCCATTGCTGGAAGTTCTTTTGCATCAGGATTTGGAGCAATGTATCTATCTGTCGGTGGCATGTTACTGTTTGTGCTTTCATTTGCTTTTGGCGCTGGTCCAGTTCCTTGTCTTGTCATGTCTGAAATGCTACCAGGCAATATTAGAGCAAAGGCAATGGCCATTTGCCTGGCTGTACATTGGGCGATAAACTTCTGCGTGGGTCTATTTTTTTTGCGCTTGCTGGAGCTAATTGGTGCTCAAGTCCTGTATAGTATTTTTGGTTCATTTTGTTTGATAGCGGTGGTTTTTGTGAAGAAATATATTCTGGAAACAAAAGGGAAGTCACTTCAGGAAATTGAAATTGCACTTCTTGCACAAGAAGCAAGCTAA 1554 0.4382 MLICIDLSAFLTPFQILHLAPPRRYSLANFGEVIYRFAMRGRQRVASKDHILGQDKDENLASVRIQNAKPCWWRSFRHVLVASLSSFLYGYHIGVVNETLESISVDLGFSGNTMAEGLVVSVCLGGAFIGSLFSGWMADGVGRKRSFQLCALPMIIGAGMSATAKTLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGAFGALTQIATCLGLMGSFFIGIPAKEIVGWWRICFWVSIVPAAMLALFMEICAESPHWLFKIGRTTEAEAEFEKLLGGVHVKPAMTELSKSDRGDASDTVTLSDLICGRHFRVMFIGSTLFALQQLSGINAVFYFSSTVFESFGVPSDIANTCVGVCNLLGSVIAMILMDKLGRKSLLMGSFLGMALTMGLQAIAGSSFASGFGAMYLSVGGMLLFVLSFAFGAGPVPCLVMSEMLPGNIRAKAMAICLAVHWAINFCVGLFFLRLLELIGAQVLYSIFGSFCLIAVVFVKKYILETKGKSLQEIEIALLAQEAS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00201 517 CDD MFS_GLUT_like 81 498 - -
Phco1g00201 517 ProSitePatterns Sugar transport proteins signature 1. 367 383 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco1g00201 517 SUPERFAMILY MFS general substrate transporter 64 508 IPR036259 -
Phco1g00201 517 ProSiteProfiles Major facilitator superfamily (MFS) profile. 78 500 IPR020846 GO:0022857
Phco1g00201 517 ProSitePatterns Sugar transport proteins signature 1. 134 151 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phco1g00201 517 Gene3D MFS general substrate transporter like domains 73 512 IPR036259 -
Phco1g00201 517 FunFam facilitated trehalose transporter Tret1 72 513 - -
Phco1g00201 517 PANTHER SOLUTE CARRIER FAMILY 2 71 512 IPR045263 -
Phco1g00201 517 NCBIfam sugar porter family MFS transporter 62 507 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco1g00201 517 PRINTS Sugar transporter signature 435 447 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco1g00201 517 PRINTS Sugar transporter signature 412 433 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco1g00201 517 PRINTS Sugar transporter signature 86 96 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco1g00201 517 PRINTS Sugar transporter signature 171 190 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco1g00201 517 PRINTS Sugar transporter signature 326 336 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phco1g00201 517 Pfam Sugar (and other) transporter 79 509 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00201 Phco-Chr1 1419758 1427992 Dispersed/Wgd