Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00197 ATGGAACAAGAACAGGAAGGTTACAGGTCCAAACTATTCAATTTCAAAGGAATGTTTGACAATGCAGGGAGGCATACAAAGAGTTTGAGCGTTGAGAGTGCCACAGCATTAGATCCTGCTCCTTCAGAGGAAGATCCAGTGTCATCAAAATGTCAAGGATCAAAATCTCTAAATGATCCAGATAAGGCTCCTAAGCCAAGGGTAAACAAGGAGGAAATTGTAGCCAAAGAAGCCAAAGACAAACTAGTGCAAGAATTGGAACAGATGAAGGAGAGATTTGCTAAACTCCTGTTGGGGGAGGATATGTCTGGTGGAGGAAAGGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTCACAAATCTTGCAGCTGCTGTTTTTGGAGAGCAAAAGCGCCTAGAGCCAATGCCCCCGGAGAGGAAGGCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTCACCGATTACATTGTTGAAATGGTTCCTGTACAACAAAAAAACAAGGATGGCTCAATGATGGAGGTTATGACAACACGACAGAGAACTGATCTCCACATGAATATCCCTGCCTTACGAAAGCTTGATACCATGCTTATTGACAGTTTGGATAACTTCAAAGACCAAACCGAGTTCTATTATGTATCAAAAGATGCAGATGACCCTGATAATAGAAAAAACGATACCAAGTGGTGGTTGCCTACACCTAAGGTTCCCCCAGAGGGTCTATCTGATGCAGCAAGAAGGTTTGTTCAGTATCAGAAAGATTGTGTGAACCAAGTACTTAAAGCAGCTATGGCCATAAATGCTCAAACTCTTTCAGAAATGGAGATCCCTGAGAGCTATATTGAATCCCTGCCCAAGGCAAGTCAAAAGGAACTAAATGGAAGATCAAGTCTAGGGGACATGATATACAGGAGCATTACAGAGGAATTTTTCGACCCTGATCAGCTCCTAGCATCTATGGACATGACATCAGAACACAAAATCCTAGATCTCAAGGACAGAATTGAGGCATCCATTGTGATTTGGAGACGGAAGATGAACCAAAAAGATTGTAAATCAGCTTGGGGTTCTGCTGTGAGTATGGAGAAGAGAGAACTCTTTGAAGAGAGAGCAGAAACCATCTTACTTCTCTTAAAGCATCGTTTTCCAGGGATTCCCCAATCTGCATTGGATATAAGCAAAATCCAATTCAACAGGGATGTGGGGCAAGCTGTTCTTGAAAGTTATTCTAGGATATTGGAGAGCTTGGCCTTCACAGTGCTGTCAAGAATAGAAGATGTACTCCACGCAGATTTCCTCACTCAAAATCCACCACAATCAAGCAGAAGAAGTGTTTCCAGAAACACAACTTCCAAGCCAGATAAATCTCCAACTCCTAAAGAAGAGGTGGAAAAGGGTGGCTCAGAAACAATGACACTATCAGATTTCATGGGTTGGAGCAGTGATCAAGGTGACTCTGACGCTAAGAGAGACCCCTCAGATGACCTCTACAATGACATGGATAATGGAAAGCCCCAAAAACTTCCAGACGTAGTTACTGACAAGAAAGTGTCCTACCTTGAGACATTGGGAGGTATGAGAAGTCCAACAGCACGCCATTGA 1608 0.4279 MEQEQEGYRSKLFNFKGMFDNAGRHTKSLSVESATALDPAPSEEDPVSSKCQGSKSLNDPDKAPKPRVNKEEIVAKEAKDKLVQELEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPVQQKNKDGSMMEVMTTRQRTDLHMNIPALRKLDTMLIDSLDNFKDQTEFYYVSKDADDPDNRKNDTKWWLPTPKVPPEGLSDAARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKASQKELNGRSSLGDMIYRSITEEFFDPDQLLASMDMTSEHKILDLKDRIEASIVIWRRKMNQKDCKSAWGSAVSMEKRELFEERAETILLLLKHRFPGIPQSALDISKIQFNRDVGQAVLESYSRILESLAFTVLSRIEDVLHADFLTQNPPQSSRRSVSRNTTSKPDKSPTPKEEVEKGGSETMTLSDFMGWSSDQGDSDAKRDPSDDLYNDMDNGKPQKLPDVVTDKKVSYLETLGGMRSPTARH 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00197 535 FunFam Rop guanine nucleotide exchange factor 14 315 442 - -
Phco1g00197 535 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 28 484 IPR038937 GO:0005085
Phco1g00197 535 FunFam Rop guanine nucleotide exchange factor 14 78 313 - -
Phco1g00197 535 MobiDBLite consensus disorder prediction 29 72 - -
Phco1g00197 535 FunFam Rop guanine nucleotide exchange factor 9 277 399 - -
Phco1g00197 535 MobiDBLite consensus disorder prediction 436 455 - -
Phco1g00197 535 MobiDBLite consensus disorder prediction 456 470 - -
Phco1g00197 535 MobiDBLite consensus disorder prediction 486 503 - -
Phco1g00197 535 MobiDBLite consensus disorder prediction 436 515 - -
Phco1g00197 535 Coils Coil 68 92 - -
Phco1g00197 535 Gene3D PRONE domain, subdomain 1 90 433 - -
Phco1g00197 535 ProSiteProfiles PRONE domain profile. 76 443 IPR005512 GO:0005085
Phco1g00197 535 Gene3D PRONE domain, subdomain 2 277 399 - -
Phco1g00197 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 85 437 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00197 Phco-Chr1 1385439 1387959 Dispersed/Wgd