Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00195 ATGGGATCGATTGGGGTACTCCTCGTGGCTCAAGTGATGCCCTACCTGGAGCAAGAGCTCGACAAGCGCTATAAGCTGTTCCGCGCGTGGGATTACCCGAACGCGGTGCAACTGCCGAGTCAGCACGCCACCTCCATCCGCGCGGTGGTCGGAAACGCGAGCGCCGGCGCGGACGCTGCGCTGATCGAGGCGCTGCCGAAGCTGGAGATCGTGTCGAGCTTCAGCGTGGGAGTGGATAAGGTTGACCTGGAGAAGTGCAGAGAGAAGGGGATTCGCGTGACCTACACGCCTGACGTGTTGACCGACGATGTGGCAGACCTCGCTATTGGCTTGATGCTGGCGCTCCTCAGGAGGATCTGCGAATGCGATCGCTATGTCAGGAGCGGCAATTGGAAGCACGGTGACTATAAGTTGACCACTAAGTTCTCTGGGAAAACTGTTGGCATTATTGGGCTAGGGAGGATAGGCCAAGCAATTGCCAAGAGAGCTGAAGCATTTAACTGTCCAATATGCTACTACTCTAGAACTGAAAAACGAGACTCGAAATACAAGTACTATCCAAGTGTTGTAGAATTAGCATCTAATTGCGACATACTGGTAGTAGCTTGCCCACTGACGGAGGAAACCCATCACATAATCAACAGGGAGGTGATGAATGCCCTGGGTCCCAAGGGTTATCTTATTAACATTGGAAGAGGTAAGCATGTTGATGAGGCAGAGTTAGTCCCAGCACTTGTAGAAGGTCGTTTGGGTGGGGCTGGGCTAGATGTGTTTGAAAATGAGCCTGTTGTTCCCCAAGAGCTATTTGAACTTGAAAATGTTGTCTTGCTGCCCCATGTCGGAAGTGGCACATTAGAAACTCGAACGGCCATGGCTGACCTTGTCCTTGGAAACCTCGAAGCTCATTTCCTTGGAAAGCCACTGTTAACTCCCTTAGTTTAA 942 0.518 MGSIGVLLVAQVMPYLEQELDKRYKLFRAWDYPNAVQLPSQHATSIRAVVGNASAGADAALIEALPKLEIVSSFSVGVDKVDLEKCREKGIRVTYTPDVLTDDVADLAIGLMLALLRRICECDRYVRSGNWKHGDYKLTTKFSGKTVGIIGLGRIGQAIAKRAEAFNCPICYYSRTEKRDSKYKYYPSVVELASNCDILVVACPLTEETHHIINREVMNALGPKGYLINIGRGKHVDEAELVPALVEGRLGGAGLDVFENEPVVPQELFELENVVLLPHVGSGTLETRTAMADLVLGNLEAHFLGKPLLTPLV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00195 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 282 IPR036291 -
Phco1g00195 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 IPR006140 GO:0051287
Phco1g00195 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 41 310 IPR006139 GO:0016616|GO:0051287
Phco1g00195 313 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 135 - -
Phco1g00195 313 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 IPR029752 -
Phco1g00195 313 Gene3D - 17 307 - -
Phco1g00195 313 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 5 308 - -
Phco1g00195 313 Gene3D - 101 284 - -
Phco1g00195 313 CDD HPPR 4 303 - -
Phco1g00195 313 FunFam Putative 2-hydroxyacid dehydrogenase 101 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00195 Phco-Chr1 1381331 1383580 Dispersed/Wgd