Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00115 ATGGCAACGGCGACATACCCTCCACCGCCACCTTTTTACAGGCTTTACAAAGATTACTTGCAAGACCCTAAGTCTGCTCCCGAGCCTCCGCCGCCTATTGATGGGACCTACGTGTGTTTCGGAGGCAATTACACGACTAGTGATGTTCTACCAAGCTTGGAAGAACAAGGCGTGCGCCAGCTCTATTCTAAGGGGCCGAATGTTGATTTCAAGAAGGAGTTGAGGTCACTTAATGGAGAGTTGCAACTACATGTCTTGGAGCTTGCTGATATTCTTATTGAGAGACCTTCACAGTATGCAAGGAGAGTCGAAGAAATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCATTGCGTCCTCATCAGGCGAGAGCAACATTGATTCACATTTTGGAACTTCAGATACAACACCGTAAACAGGCAGTGGAGGATATAAAGAGGAGGAGAGAAGAAGCACGACGGCTCCTTAACGAGTCCTTGGCAACACTTGATGGTCATTAG 507 0.4576 MATATYPPPPPFYRLYKDYLQDPKSAPEPPPPIDGTYVCFGGNYTTSDVLPSLEEQGVRQLYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIQHRKQAVEDIKRRREEARRLLNESLATLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00115 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
Phco1g00115 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Phco1g00115 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Phco1g00115 168 Coils Coil 137 164 - -
Phco1g00115 168 Gene3D - 60 159 IPR044888 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Phco1g00115 Med7 8.7e-43 No_clan