Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00083 ATGCATGTGAAAGATTTTCCTGAAGAATGTTGGGAATCAGTCTTCAGATTCCTTGGCCTTGGTCATCATTTGGAGTCTCTATCTATGGTTTGCAAGCAGTTTCTTTCCATCACAAATAGGCTTCTATTCTCTCTCACAGTGTATGATCCAACCACTCCTCTCCTTGCTCGGTTGTTCCTGAGGTTTCCAAGGCTCAAAATCTTAGACCTCAGTCTCTTGAATGGCCACCATGAAGGCTTGCTTCATCAAATTTCACAATCCGGGTTGGACCTTCATTTGATTAATCTATCCAACCAGAGAACACTTCCTGTTGATGGCTTGCGAGAACTTGGCTCGAACATGAAAAATTTGAGGGTTCTGATCTGCTCAAACACTGGCTCTCTTCGTGATAGTCATCTGGTAATAATAGCTTATTGTTTCCCATTTCTTGAAGAGCTTGACATAAGCTTCCCATTGAATTCTCAAGTATCTGATTTCGGGGTACTAAGGCTGTCTTCTATGCTTGAGAATCTTCGCAAGATTAATATCTCTGGTAATCACTTGATCACTGATAAATCCTTGTTCTATCTTTGCCAAAACTGTTTGTCATTGGAAGAGATTTCATTCTTCATTTGTTTTAAGATCACTCAAATTGGCATTGCCTCTGCGATCCGCCTCAGACCCGGTTTGAGCTCCATTTCCTTTAACATTGAAAAGAAAAGAATACATGGACCTGGTTTAACACTCACCCCCATTGATTTGAATTTGATTGATTCATTCAAGAGTTTGAAAAGGTTAACTGCTATTGATTTGTCAAATTCTGTCATCTCGGATGAGTTTCTCTATGCGGTTGCAGAAGGTGGAGGTATTCTGCTAAAGAAGCTTACCCTCCAAGACTGTTGCAATTGTACATTTTTAGGAATCTCTTATGTGTTATCCAAATGCCAATCTGTTCAATGCTTGGATCTTCGAAAAGTTGATTTTTTAACTGATCAATGTATCAGTAAGTTATCTGTATTTCTTCTTAGCCTAACTACTATAAACCTCAGTGGTTGCTGCCAGCTGACCAATTCAACATTTTTCATCCTCACAAGAAACTGTCCTTTGCTCAGTGAGATCAAAATGGAAAGGACATATCTTGGGGTGGAAGGGGAAGAAGATTCAATGAGGGATTTTGTTGTCAACCTTGAAGTGAAAAAAGTGTATTTGGGTGATAATGTTTTGCTGAGTGATGCAAGTTTGATAAAATTTGTTTCCATTTGTCCTAGTTTGCAGCTTCTTGACTTAATCGGTTGTGAGGGTGTTTCTGGTGAAGGTATTGCTGATGTTTTGAAGAGATGCAGTGAGATAAGGCATTTGAACCTGGCCAATACAGGAATGAAAGTGTTTGAGATAGACTTTGAAGTTTCCAAACTGGAAGTGTTGAACTTGTCAGGGTCAAAAATTGAGGATGAAGCTCTCTCAATAATCTCAAGGAGGTGTAGTGGACTACTACTTCTGAACATCCAGAGTTGCTGGCGTGTTACAGCTAAGGGTGTAGTGGAAGTAGTAGAAAACTGCAGGACATTGAAAGAGTTGAATCTAAAGAATTGTAGGTTGGTGAGTGATGATTTTGTTGCTTGGCTGGAGTTTTCAAAACCATCATTGAGAACAGTAGCCACACCTTCTGATGTTGATGTTTATTGCTGA 1668 0.3957 MHVKDFPEECWESVFRFLGLGHHLESLSMVCKQFLSITNRLLFSLTVYDPTTPLLARLFLRFPRLKILDLSLLNGHHEGLLHQISQSGLDLHLINLSNQRTLPVDGLRELGSNMKNLRVLICSNTGSLRDSHLVIIAYCFPFLEELDISFPLNSQVSDFGVLRLSSMLENLRKINISGNHLITDKSLFYLCQNCLSLEEISFFICFKITQIGIASAIRLRPGLSSISFNIEKKRIHGPGLTLTPIDLNLIDSFKSLKRLTAIDLSNSVISDEFLYAVAEGGGILLKKLTLQDCCNCTFLGISYVLSKCQSVQCLDLRKVDFLTDQCISKLSVFLLSLTTINLSGCCQLTNSTFFILTRNCPLLSEIKMERTYLGVEGEEDSMRDFVVNLEVKKVYLGDNVLLSDASLIKFVSICPSLQLLDLIGCEGVSGEGIADVLKRCSEIRHLNLANTGMKVFEIDFEVSKLEVLNLSGSKIEDEALSIISRRCSGLLLLNIQSCWRVTAKGVVEVVENCRTLKELNLKNCRLVSDDFVAWLEFSKPSLRTVATPSDVDVYC 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00083 555 Gene3D Ribonuclease Inhibitor 455 547 IPR032675 -
Phco1g00083 555 Gene3D Ribonuclease Inhibitor 380 454 IPR032675 -
Phco1g00083 555 FunFam F-box/LRR-repeat protein 4 239 374 - -
Phco1g00083 555 FunFam F-box/LRR-repeat protein 20 460 547 - -
Phco1g00083 555 SUPERFAMILY RNI-like 288 544 - -
Phco1g00083 555 Gene3D Ribonuclease Inhibitor 235 376 IPR032675 -
Phco1g00083 555 Gene3D Ribonuclease Inhibitor 1 234 IPR032675 -
Phco1g00083 555 PANTHER UNCHARACTERIZED 254 533 - -
Phco1g00083 555 Pfam Leucine Rich repeat 170 191 IPR001611 GO:0005515
Phco1g00083 555 Pfam Leucine Rich repeat 512 529 IPR001611 GO:0005515
Phco1g00083 555 SUPERFAMILY RNI-like 52 375 - -
Phco1g00083 555 SMART LRR_CC_2 140 167 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 513 540 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 462 486 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 256 280 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 414 439 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 168 193 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 487 512 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 334 359 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 194 219 IPR006553 -
Phco1g00083 555 SMART LRR_CC_2 21 48 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00083 Phco-Chr1 602868 604535 Tandem