Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00082 ATGTCAGAAGAAGAAGATTTAGACTTACCTGATGAATGCTGGGAATTGGTATTCAAATTCCTCAAACCCAATCCTCATTTTGAACCTCTCTCTCTTGTCTCAACCCAATTCCTCTCCATCACTAATATCCTTCGAACCTCTCTCACCATATCCAACCCAACACTTCCCTATCTCCCCAACCTCTTCCTAAGGTTCCCCTGCATCACCTCCCTTCACCTCACGCGCCTCCACCACTCCCACCTCCACACGCTCCTCATACAACTCTCACGCGCCGCCCTACCCCTCCAATCCCTCAACCTCTCCGGCCACCCCTCCATCCCCTCAAATGGGTTGCGGGCGTTCGCCAGAAAGATCCCAACTTTGAAATCCCTCACCTGCTCCCACATGGGTTTTCTCCGAAACGCCGATCTCCTTCTAATCGCTGATTGTTTCCCTTTCCTCGAACATCTCGACCTCAGTTTCCCCGAAAATAGCGATAATTCCACAGTTTCCGATTTCGGCATAAAGGCTCTCTCTTTGGCCCTCCCCAAGCTTCGCAGCGTTAACCTCTCCGGCAATTTCTTCATCAACGACCTTTCCATTCTCAGTCTCTGCAAGAACTGCGAGCTTCTCGAGGAAATTATAATCTTTGAGTGCCACTTCATCACGCAACGCGGCATCGCTTCCGCGATTCGTGAAAGACCGTGTTTGCGTTCTTTCTGCGTTAGCAATTTTGGGTGTGGAACAAAGAAGGGTGACATTGGCAGACCCTATGCGACTTCTGATTTCATCAGTGCGTTGGTGGGTTTGAAGGGCTTGACTTGTCTCGATTTGTCGTGTTCTTCTATCTCGGACGAGTTGCTATGCTGTGTTGCGGAAGAAGGGATTCCTTTGAAGAAGCTTGTTTTACAAGGTTCTTGTAACTATAGTTACCTTGGAGTGTTGTGCTTGTTGTCCACATGTCAGTCTGTGGAGCATTTAGATCTTCAAAACGCTGAGTTTCTGTGTGATCAGCGTGTGGAAGAGTTGTGTGAGTTTCTTGGGAATTTGGTGTCTATAAATGTTAGTGGTTGTAGGATGTTAACTGATTTAGCTTTGTTTGAACTCGTTAGGAAGTGTCCTTTGTTGAATGAGATCAAAATGGAGGCAACAGATGTTGGGAAGAAGGGGGTTGATCATGAGTTTGTGAATGGTGTTGTGAATTGTCGGGTGAAGTCTCTCTATTTGGGAAGCAATTCCTGGTTGAGGGATGAAACTGTTGAAATGATTGCTTCTGTTTGCCCCAGTTTGGAGGTGCTTGATTTGAGTTCTTGCTGTGGCATATCTGAAGGTGTTGTCGAGGTTTTAAGGAGGTGTGGTGAGGTTAGGAATTTGAGCTTGGCCTTTTGTTCGGGAGTGAAGTTCACTGGGCTGGACTTTGAAGTTCCAAAACTAGAGGAGTTGAACTTGTCACGATCAGGAGTTGATGATGAAATGCTTTCTGTGATCTCAAAGTTCTGTCGTTGGTTGCTGCATTTGGACTTGGAAAATTGCTCCGGTGTCGCAGCCAAGGGGGTTAGGGAAGTGGTGGAGAAGTGCACGCGATTGAGGGAGATTAATTTAGTGTCTTGTTGTGAAGTGGGAGCTAGTGTTGTTGCTTGGATGGTATTTTCAAGGCCATCATTGAGAAGGATAATGGCCCCCCCGAGTTTTGATCTCAGTGGTGGCCAGAGGGAACTCCTCTTGCGTCATGGGTGCATTGTTAGCTTGTAG 1731 0.472 MSEEEDLDLPDECWELVFKFLKPNPHFEPLSLVSTQFLSITNILRTSLTISNPTLPYLPNLFLRFPCITSLHLTRLHHSHLHTLLIQLSRAALPLQSLNLSGHPSIPSNGLRAFARKIPTLKSLTCSHMGFLRNADLLLIADCFPFLEHLDLSFPENSDNSTVSDFGIKALSLALPKLRSVNLSGNFFINDLSILSLCKNCELLEEIIIFECHFITQRGIASAIRERPCLRSFCVSNFGCGTKKGDIGRPYATSDFISALVGLKGLTCLDLSCSSISDELLCCVAEEGIPLKKLVLQGSCNYSYLGVLCLLSTCQSVEHLDLQNAEFLCDQRVEELCEFLGNLVSINVSGCRMLTDLALFELVRKCPLLNEIKMEATDVGKKGVDHEFVNGVVNCRVKSLYLGSNSWLRDETVEMIASVCPSLEVLDLSSCCGISEGVVEVLRRCGEVRNLSLAFCSGVKFTGLDFEVPKLEELNLSRSGVDDEMLSVISKFCRWLLHLDLENCSGVAAKGVREVVEKCTRLREINLVSCCEVGASVVAWMVFSRPSLRRIMAPPSFDLSGGQRELLLRHGCIVSL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00082 576 SMART LRR_CC_2 144 169 IPR006553 -
Phco1g00082 576 SMART LRR_CC_2 493 518 IPR006553 -
Phco1g00082 576 SMART LRR_CC_2 201 226 IPR006553 -
Phco1g00082 576 SMART LRR_CC_2 340 365 IPR006553 -
Phco1g00082 576 SMART LRR_CC_2 175 200 IPR006553 -
Phco1g00082 576 SMART LRR_CC_2 420 444 IPR006553 -
Phco1g00082 576 SMART LRR_CC_2 92 117 IPR006553 -
Phco1g00082 576 PANTHER UNCHARACTERIZED 265 535 - -
Phco1g00082 576 Pfam Leucine Rich repeat 420 434 IPR001611 GO:0005515
Phco1g00082 576 SUPERFAMILY RNI-like 8 239 - -
Phco1g00082 576 Gene3D Ribonuclease Inhibitor 5 394 IPR032675 -
Phco1g00082 576 Gene3D Ribonuclease Inhibitor 396 561 IPR032675 -
Phco1g00082 576 FunFam F-box/LRR-repeat protein 20 466 553 - -
Phco1g00082 576 SUPERFAMILY RNI-like 254 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00082 Phco-Chr1 596271 598001 Tandem