Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00071 ATGGATAGCGAGGAGGTCCCTTCAGCACCTTCCACACCTGCAACACCAGGGACTCCAGGGGTCCCTCTTTTTGGTGGCCTCAGGTTTGAGAAACCTAATGTTGTTAGGAAATCGTCCTTCCTCAGAAGCTGCAAATGCTTCAGTGTTGAAGAATGGACCTTGGAAGATGGAGCCATGCCTAGAGTCTCTTGCTCTTTACCACCCCCTCCCGTCCCTCTCGCAAAAAAGGTTGGAGCTGAGTTTATTGGCACGTTCATTCTCATGTTTGCCGCTATAGGCACTGCTATTGTGAACCAAAAGACTCATGGCTCAGAGACTCTAATTGGATGTGCTGCAGCAAATGGACTTGCTGTCATGATCATCATTTTCTCCACTGGTCACATCTCTGGGGCTCATCTCAACCCCGCTGTCACCATTTCCTTCGCTGCATTAAAGCACTTTCCGTGGAAGAATGTACCAGTGTATATTGGTACACAAATTTTGGCATCAGTAAGTGCTGCATTTGCTGTGAAGGCGGTTTTTAATCCCTTCATGAGCGGTGGAGTGACGGTCCCTTCTGTAGGATATGGGCAAGCTTTCGCCACAGAGTTCATTGTCAGCTTTATTCTCATGTTCGTGGTCACTGCAGTAGCCACCGACACACGAGCTGTGGGAGAGCTTGCAGGAATCGCAGTGGGAGCCACAGTGATGCTCAACATACTTATAGCCGGGCCAGCAACTGGAAGTTCAATGAACCCTGTTAGAACATTGGGTCCAGCCATTGCTGCAAACAACTACAAGGGCATATGGGTGTATCTCATTGCTCCCATATTTGGAACTCTGTGTGGGGCAGGTGCCTACACTGTGGTGAAGCTGCCCGAAGAAGAGGCAACAAAGCCTCCTATTTCACCTCCTGCCATTGTTGGAAGCTTCAGAAGGTGA 921 0.494 MDSEEVPSAPSTPATPGTPGVPLFGGLRFEKPNVVRKSSFLRSCKCFSVEEWTLEDGAMPRVSCSLPPPPVPLAKKVGAEFIGTFILMFAAIGTAIVNQKTHGSETLIGCAAANGLAVMIIIFSTGHISGAHLNPAVTISFAALKHFPWKNVPVYIGTQILASVSAAFAVKAVFNPFMSGGVTVPSVGYGQAFATEFIVSFILMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGSSMNPVRTLGPAIAANNYKGIWVYLIAPIFGTLCGAGAYTVVKLPEEEATKPPISPPAIVGSFRR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00071 306 PANTHER AQUAPORIN NIP2-1 45 291 IPR034294 -
Phco1g00071 306 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Phco1g00071 306 Gene3D Glycerol uptake facilitator protein. 70 294 IPR023271 -
Phco1g00071 306 Pfam Major intrinsic protein 73 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco1g00071 306 SUPERFAMILY Aquaporin-like 72 290 IPR023271 -
Phco1g00071 306 MobiDBLite consensus disorder prediction 1 23 - -
Phco1g00071 306 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco1g00071 306 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco1g00071 306 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco1g00071 306 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco1g00071 306 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco1g00071 306 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco1g00071 306 FunFam Aquaporin NIP2-1 63 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00071 Phco-Chr1 521449 525067 Transposed