Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00067 ATGGCCTCTCCTGATGAGACTGAGAGGAGTGTGGCAAAAAAACTTAGACATTTGGGGAGGAAGCTCCTCAAGGGCTCTTCACTTCACAAGCTTATGCAGCTGCTTCTTAAATTGGAGCTTGTATTATCAACCCTGGATCAAGAACCAAGTAAGCCAATTCAAGAATCACTTGTACCTTCCATGAAGGCATTGATTTCAGATGAACTTTTGAGGCACACAGATGAGAATGTTAAGATTCTAGTTATATCTTGCATCTCTGAGATTACAAGAATCACAGCGCCAGATGCTCCTTATGACGATGAACAAATGAAGGAAATATTCAAGCTCACGGTGGCATCTTTTGAGAAGTTGTCTCACATATCTGGCTGTGGCTATGAAAAAGCGCTTACCATACTTGATAATGTCAATAAGGTCAGATTATGCTTGGTCATGCTGGACCTTGAGTGTAATGACCTGGTTATTGAAATGTTTCAGCATTTCTTGAGATTCATAAGGTCAAACCATCCTTGTCATGCATTTCATTCAATGGAATCAATAATGACCTTGATCTTACAAGAAAGTGAACAAATTTCCCCAGATCTTCTTAGACCTCTGTTGGATAGTGTAGGAAATGAAAATCAGACTATTTCACCTATGTCTTGGACATTGGGTGAGAAAGTAATCCGCAACTGTACTGCCAAGCTCAAGCCTTATCTCATGAAGGCAGTGGAGTCCTCAGGCAGAGCTCTAAATGAGTATGCACAGATAGTAACTGATATTTGCCAGAATGAATCTGAATCCCCCCAACGTGATGATGCAAATGGTTCTAAGAAGACAGTGGCTCAGGAAGCTGGTAACAAGCTTAATGTTCCTAAAGATGCAAAGGAACAGCCATATGATGAAACCGAGGGTCATGAACCCAATGATTCTAGTAAGACAGATGTCCAAATTTTGGATGATAAAAAGTCAAACAGAAGGGACACTATGGATGGTGAAGTTATAAAAAAAACTGGTTCAAAAAGGAGATCTCCTTCTGAAATTACCAAGAAATCTGAAAGAGGGAGTGCAAAAGCCAAGTTGGAAACTGACAATTTAGAGTCTGTTCAGGAACCAAAATCAGAAACTCAGCCGAATACTGCGTCAAGGAAGAGGGGGCGTAAGCCAAATTCTCTAATGAATGCAGAAGAAGGCTATGATCACTCATGGATTTGTCGGGAAACTGAAGTGGAAAAATCAACACTGTCCAGAAAGACTCGTGAATCCAGGTCTCCTTTTCCATCTTCTGAAAAACCTACTTCCAAAAAAGATAAGTTGCATCGAAAGCCTAAAACTGTAAGTGAAACTCTAGTTTGTAAGCCGAAAAGTGAGAACATAGCAAAACCTGCCAAATCCAGAAGGACTCACAATATTGGCAATGATACAAGTGAAGGTTGTGAAGCTTTAGCTTCTAAACCTAAAACTAATGATAATACTGATCCTTCTCCTTCTATAAATAATACTATTTCTGATGGCCACATCAAACAAGGTCGGAGAAGGAAATTAAATAGCACGGGGAATCAAGATGTTCATTCCAATTCTTTGTCAATGTTAAAAGACAACTTGAATCGTCTGCCTGAGAAGATTTCTCTGGATTCCCCAACAGTTAGGTTGGAAAAGGAATCTGAAGTAAGGAATATCTCTCAACAAAAACCCATTAGGAAAATCAAATTTTCTGTAAAGATTGATGGAAAACTTGTCATGGGCCCAGAATCAGCTGCTAATAGGGAGCCTAACGTTTCATGTGGAGATGAGGGAAAACACAAGTCATCTATGAATGATGAGCTAGAAAACACAACTCAAACAAATGTTAAAAAAAGGAGGAGGCGTGATGCTACTCCCAATGAGGGCCTCTACAGATCATCAGCTGTGAAGGAGCTGATTGCAGAATCTGCAAGTAAAACATTAAATGGTGTCAAGGAAACCCTACAAGCAAGGCTGAGGAGAAGACACAGTAATGTGAATGCTGAGGCATCTGAATCTCATCATGGTAACTCATTTGTTGGTAGTAGAATCAAGGTATGGTGGCCAAAAGATAAGATGTTTTATGAAGGTGTTATTGAATCTTATGATCCTATCAAAGGAAAGCACAAGATTTTGTATGCGGATGGTGATGTTGAAGTGTTGAACCTCAAAAGACAGCGTTGGAAACTAGTTGATGCTTCGTTAGATGAGGAAGGGCTTGCACTTCAGAGGCTCGCAGAAGCATCAGACGTATCAGAAAAAGGCAAGGGAAAATCAAAGTTGGAGTCATCCAAAGCTGCAAATATCAAATCTCAGTCCAGAAAAGACTCCAAGAAGCCTAAAAACCGAAAGAGGGACAGCTGA 2343 0.4016 MASPDETERSVAKKLRHLGRKLLKGSSLHKLMQLLLKLELVLSTLDQEPSKPIQESLVPSMKALISDELLRHTDENVKILVISCISEITRITAPDAPYDDEQMKEIFKLTVASFEKLSHISGCGYEKALTILDNVNKVRLCLVMLDLECNDLVIEMFQHFLRFIRSNHPCHAFHSMESIMTLILQESEQISPDLLRPLLDSVGNENQTISPMSWTLGEKVIRNCTAKLKPYLMKAVESSGRALNEYAQIVTDICQNESESPQRDDANGSKKTVAQEAGNKLNVPKDAKEQPYDETEGHEPNDSSKTDVQILDDKKSNRRDTMDGEVIKKTGSKRRSPSEITKKSERGSAKAKLETDNLESVQEPKSETQPNTASRKRGRKPNSLMNAEEGYDHSWICRETEVEKSTLSRKTRESRSPFPSSEKPTSKKDKLHRKPKTVSETLVCKPKSENIAKPAKSRRTHNIGNDTSEGCEALASKPKTNDNTDPSPSINNTISDGHIKQGRRRKLNSTGNQDVHSNSLSMLKDNLNRLPEKISLDSPTVRLEKESEVRNISQQKPIRKIKFSVKIDGKLVMGPESAANREPNVSCGDEGKHKSSMNDELENTTQTNVKKRRRRDATPNEGLYRSSAVKELIAESASKTLNGVKETLQARLRRRHSNVNAEASESHHGNSFVGSRIKVWWPKDKMFYEGVIESYDPIKGKHKILYADGDVEVLNLKRQRWKLVDASLDEEGLALQRLAEASDVSEKGKGKSKLESSKAANIKSQSRKDSKKPKNRKRDS 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00067 780 CDD Tudor_Agenet_AtEML-like 673 723 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 477 497 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 451 465 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 257 519 - -
Phco1g00067 780 SUPERFAMILY Tudor/PWWP/MBT 670 711 - -
Phco1g00067 780 FunFam Binding protein 668 720 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 392 440 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 586 619 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 742 768 - -
Phco1g00067 780 Pfam Sister chromatid cohesion protein PDS5 protein 30 232 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 362 379 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 282 361 - -
Phco1g00067 780 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 270 774 IPR039776 GO:0007064
Phco1g00067 780 Gene3D - 664 718 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 576 619 - -
Phco1g00067 780 MobiDBLite consensus disorder prediction 741 780 - -
Phco1g00067 780 SUPERFAMILY ARM repeat 41 244 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00067 Phco-Chr1 494612 502686 Wgd