Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00065 ATGTTGAAGACGTTTCTTCTTTTTTTTATCTCAGTTTTGGGTGAAGAAGAAAATATGAGTGTGAGAGGTTCTTCTTCTGGGCAGCCTCAGTTCATTGCCAGCACCGGTAACAGGAGTTTGTCCAATGCGCCGTTGATTGAGAATCCAGACTGTGATCAAATTGTTGTACCTGATAGAACCAGCTGGAAAAACTTATTTGCATACGTTGGGCCTGGATTTCTTGTTTCCATTGCATATATCGACCCTGGAAACTTTGAGACGGATCTTCAATCAGGAGCACAATATAAATATGAGTTACTATGGATCATATTGGTGGCCTCATGTGCTGCTCTTCTAATTCAAACAATGGCTGCTAATCTTGGGGTTGTCACTGGAATGCACCTAGCTGAGCATTGTAGAGCTGAATATTCTCGGCTACCCAACTTTATCCTTTGGGTGATTGCTGAAATTGCCATAGTGGCCTGTGACATTCCTGAAGTCATTGGGACGGCTTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGGTCCTCTTGGCATTACAGCAATATGGGGTTAGGAAACTGGAATTCTTCATTGCATTTCTAGTATTTACAATTGCTGGTTGCTTTATGGCTGAGCTTGGATATGCAAAGCCTGAGGCCAAAGAAGTTGTGACAGGCCTATTTGTTCCAAAACTTGAGGGGCATGGTGCCACTGGTCTAGCAATTTCACTCCTTGGGGCAATGGTTATGCCACACAATCTCTTCCTCCACTCAGCGCTGGTGCTTTCCAGGAAAATACCCCGATCAGTTCGTGGAATCAAAGAGGCTTGCAGATTTTACATGATGGAAAGTGCCTTCGCACTTACGGTGGCCTTCCTCATTAACATTTCCGTTATTTCTGTAAGTGGTGCAGTTTGCAATTCTTCAAACTTAAGTGCTGAAGATCAGAATAGTTGTCAGGATTTGGATTTGAACAAAGCCTCCTTTTTATTAAGAAATGTCTTGGGCAAATGGAGTTCAAAACTATTTGCAATTGCTTTACTTGCCTCAGGTCAAAGTTCTACCATAACAGGAACATATGCAGGGCAATACGTCATGCAGGGGTTTCTTGATTTGCGACTGAAGTCATGGATTCGGAATCTGCTAACACGTTCCTTAGCCATTGTTCCTAGTTTGATTGTTGCACTCATAGGTGGCTCTTCTGGAGCTGGGGAGCTCATCATAATTGCATCGATGATCTTATCATTTGAGCTTCCTTTTGCTCTGATTCCACTCCTCAAGTTCACTAGCAGCAAAATCAAGATGGGAGAACACGTCAACTCAATCACGATTTCAGCTGTTACTTGGATCATTGGTTCCCTCATCATGGGCATAAACATATACTATTTAATGACTAGCTTTGTGAAGTTGCTTCTTCATGCTCACTTAAGAATCGTGACTAAGGTATTTCTGGGGATATTGGGATTTTCGGGTGTGGCACTATACATGGGAGGCATTGCGTATTTAGTTTTTCGCAAAAATAAAAAGACTACATATACTCTGACATTTAGTACATCGGAAGACCAGCATATGGCGAATGAACAAGGCGATGTATCAATGTATTGTCTCCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAAAAGGAGTCCACCAGAATTTGATTAA 1689 0.4204 MLKTFLLFFISVLGEEENMSVRGSSSGQPQFIASTGNRSLSNAPLIENPDCDQIVVPDRTSWKNLFAYVGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALLIQTMAANLGVVTGMHLAEHCRAEYSRLPNFILWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLVLLALQQYGVRKLEFFIAFLVFTIAGCFMAELGYAKPEAKEVVTGLFVPKLEGHGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMMESAFALTVAFLINISVISVSGAVCNSSNLSAEDQNSCQDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKSWIRNLLTRSLAIVPSLIVALIGGSSGAGELIIIASMILSFELPFALIPLLKFTSSKIKMGEHVNSITISAVTWIIGSLIMGINIYYLMTSFVKLLLHAHLRIVTKVFLGILGFSGVALYMGGIAYLVFRKNKKTTYTLTFSTSEDQHMANEQGDVSMYCLPREDIVSMQLPQKRSPPEFD 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00065 562 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 64 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 Hamap Divalent metal cation transporter MntH [mntH]. 57 473 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 41 517 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 Pfam Natural resistance-associated macrophage protein 85 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 NCBIfam Nramp family divalent metal transporter 70 438 - -
Phco1g00065 562 PRINTS Natural resistance-associated macrophage protein signature 172 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 PRINTS Natural resistance-associated macrophage protein signature 197 218 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 PRINTS Natural resistance-associated macrophage protein signature 385 402 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 PRINTS Natural resistance-associated macrophage protein signature 247 270 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 PRINTS Natural resistance-associated macrophage protein signature 357 376 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 PRINTS Natural resistance-associated macrophage protein signature 144 170 IPR001046 GO:0016020|GO:0030001|GO:0046873
Phco1g00065 562 PRINTS Natural resistance-associated macrophage protein signature 417 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00065 Phco-Chr1 481009 485851 Dispersed/Transposed